RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 TMOD4Q9NZQ9 345 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 NYAP2Q9P242 653 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 ZKSCAN5Q9Y2L8 839 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 RAD50Q92878 1312 aa6.72□□□□□ -1.33
TMEM39A-212ENST00000497993 C9IYK1 514 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 HIP1O00291 1037 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 WDR46O15213 610 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 DYNC1LI2O43237 492 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 PPM1BO75688 479 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 CNMDO75829 334 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 CAPNS1P04632 268 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 TP53P04637 393 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 HOXC6P09630 235 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 AKR1B1P15121 316 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 GSPT1P15170 499 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 RHCEP18577 417 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 CALRP27797 417 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 PSMC4P43686 418 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 YARSP54577 528 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SESN3P58005 492 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 ETF1P62495 437 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 RHDQ02161 417 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 ICA1Q05084 483 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 BTKQ06187 659 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SEPT2Q15019 361 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 PCBP2Q15366 365 aaKnown RBP eCLIP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 LONRF1Q17RB8 773 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 PPP4R3AQ6IN85 833 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 MZT2AQ6P582 158 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 PGM2L1Q6PCE3 622 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 HID1Q8IV36 788 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 CNPY4Q8N129 248 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SHCBP1Q8NEM2 672 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 C1orf162Q8NEQ5 155 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SHKBP1Q8TBC3 707 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 ACER1Q8TDN7 264 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SMCR8Q8TEV9 937 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 POF1BQ8WVV4 589 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SOCS4Q8WXH5 440 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 CCT6BQ92526 530 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 GATA6Q92908 595 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 ERP27Q96DN0 273 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC6A18Q96N87 628 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 PSMG3-AS1Q96PY0 264 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 NACAP1Q9BZK3 213 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 VCPKMTQ9H867 229 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 FAM204AQ9H8W3 233 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 TXNRD2Q9NNW7 524 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 TRMT13Q9NUP7 481 aaKnown RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 FAM86C1Q9NVL1 165 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 SAMD15Q9P1V8 674 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 RBPJLQ9UBG7 517 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 EVLQ9UI08 416 aaPredicted RBP6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 CPA4Q9UI42 421 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 GJD2Q9UKL4 321 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 CCDC171Q6TFL3 1326 aa6.71□□□□□ -1.34
TMEM39A-212ENST00000497993 WDR81Q562E7 1941 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 CYP2D7A0A087X1C5 515 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 A0A0D9SFI3 127 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 hCG_1642624A0A1W2PR95 340 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 CBX4O00257 560 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 AQP7O14520 342 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ATP2A1O14983 1001 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 DLX3O60479 287 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 PLA2G6O60733 806 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 F13BP05160 661 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 VDRP11473 427 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 MAPK4P31152 587 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 GRK4P32298 578 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ADMP35318 185 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 GRIK1P39086 918 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 IRX3P78415 501 aaPredicted RBP6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 PPARAQ07869 468 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 SKOR2Q2VWA4 1001 aaPredicted RBP6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 MCMDC2Q4G0Z9 681 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 PRR16Q569H4 304 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 MAP3K21Q5TCX8 1036 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 MAATS1Q7Z4T9 603 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ADAT2Q7Z6V5 191 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 UBE2Q1Q7Z7E8 422 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ZNF589Q86UQ0 364 aaPredicted RBP6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 PPFIBP1Q86W92 1011 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ZDHHC13Q8IUH4 622 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ABRAQ8N0Z2 381 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 GMCL1P1Q8NEA9 526 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 DYNLL2Q96FJ2 89 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 SEC62Q99442 399 aaKnown RBP6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 DSCC1Q9BVC3 393 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 RNF38Q9H0F5 515 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 TCP11L1Q9NUJ3 509 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 APEX2Q9UBZ4 518 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 RNF112Q9ULX5 631 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 LTBP2Q14767 1821 aa6.7□□□□□ -1.34
TMEM39A-212ENST00000497993 ZNF891A8MT65 544 aaPredicted RBP6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 WDR64B1ANS9 1081 aa6.69□□□□□ -1.34
TMEM39A-212ENST00000497993 CHURC1-FNTBB4DL54 471 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms