RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RBMXL2O75526 392 aaKnown RBP5.55□□□□□ -1.52
SMC4-227ENST00000497984 PRSS23O95084 383 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 SLC6A2P23975 617 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 SESN3P58005 492 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 CCT2P78371 535 aaKnown RBP5.55□□□□□ -1.52
SMC4-227ENST00000497984 MRPS9P82933 396 aaKnown RBP5.55□□□□□ -1.52
SMC4-227ENST00000497984 PPP3CAQ08209 521 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 FOXF2Q12947 444 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 HDGFL2Q7Z4V5 671 aaPredicted RBP5.55□□□□□ -1.52
SMC4-227ENST00000497984 USP7Q93009 1102 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 RNF31Q96EP0 1072 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 PDLIM2Q96JY6 352 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 GALNT9Q9HCQ5 603 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 KCNE5Q9UJ90 142 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 AATKQ6ZMQ8 1374 aa5.55□□□□□ -1.52
SMC4-227ENST00000497984 ZEB2O60315 1214 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 ULK1O75385 1050 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 MYCLP1P12525 358 aaPredicted RBP5.54□□□□□ -1.52
SMC4-227ENST00000497984 ALDH1A3P47895 512 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 CACNA2D1P54289 1103 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 HSD11B2P80365 405 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 UBXN2BQ14CS0 331 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 CYP2A13Q16696 494 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 MUM1Q2TAK8 710 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 OTUD7BQ6GQQ9 843 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 KCNK18Q7Z418 384 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 CMIPQ8IY22 773 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 FAM43AQ8N2R8 423 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 AUTS2Q8WXX7 1259 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 ORAI2Q96SN7 254 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 REXO4Q9GZR2 422 aaKnown RBP5.54□□□□□ -1.52
SMC4-227ENST00000497984 IFT22Q9H7X7 185 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 KIAA1586Q9HCI6 787 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 TBCCD1Q9NVR7 557 aa5.54□□□□□ -1.52
SMC4-227ENST00000497984 COL3A1P02461 1466 aaPredicted RBP5.53□□□□□ -1.52
SMC4-227ENST00000497984 LRRC3CA6NJW4 275 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 POMCP01189 267 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 RAP2AP10114 183 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 IL2RBP14784 551 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 ATP5JP18859 108 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 FPR1P21462 350 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 GJC2Q5T442 439 aaPredicted RBP5.53□□□□□ -1.52
SMC4-227ENST00000497984 SP5Q6BEB4 398 aaPredicted RBP5.53□□□□□ -1.52
SMC4-227ENST00000497984 RNF180Q86T96 592 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 LMBR1Q8WVP7 490 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 STON2Q8WXE9 905 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 FATE1Q969F0 183 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 GREM2Q9H772 168 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 UNKLQ9H9P5 680 aaKnown RBP5.53□□□□□ -1.52
SMC4-227ENST00000497984 IFT122Q9HBG6 1241 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 CASS4Q9NQ75 786 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 RBM12Q9NTZ6 932 aaKnown RBP5.53□□□□□ -1.52
SMC4-227ENST00000497984 FBXO34Q9NWN3 711 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 MOCS1Q9NZB8 636 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 SLC23A1Q9UHI7 598 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 USP25Q9UHP3 1055 aa5.53□□□□□ -1.52
SMC4-227ENST00000497984 ZFPL1O95159 310 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 GPANK1O95872 356 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 MRPS35P82673 323 aaKnown RBP5.52□□□□□ -1.53
SMC4-227ENST00000497984 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 SRRM1Q8IYB3 904 aaKnown RBP5.52□□□□□ -1.53
SMC4-227ENST00000497984 ZNF384Q8TF68 577 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 TGFBRAP1Q8WUH2 860 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 ANKS1AQ92625 1134 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 UHRF1Q96T88 793 aaPredicted RBP5.52□□□□□ -1.53
SMC4-227ENST00000497984 MYOCQ99972 504 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 AIFM2Q9BRQ8 373 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 QRSL1Q9H0R6 528 aaKnown RBP5.52□□□□□ -1.53
SMC4-227ENST00000497984 LDAHQ9H6V9 325 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 DMRT3Q9NQL9 472 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 LANCL2Q9NS86 450 aa5.52□□□□□ -1.53
SMC4-227ENST00000497984 VAV2P52735 878 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 KRTAP10-9P60411 292 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 MUM1L1Q5H9M0 696 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 ZNF529Q6P280 563 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 SEM1Q6ZVN7 128 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 LNX2Q8N448 690 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 ACTRT2Q8TDY3 377 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 CASKIN2Q8WXE0 1202 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 TTC1Q99614 292 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 SENP6Q9GZR1 1112 aaPredicted RBP5.51□□□□□ -1.53
SMC4-227ENST00000497984 KLK15Q9H2R5 256 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 KCTD5Q9NXV2 234 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 LRIT1Q9P2V4 623 aa5.51□□□□□ -1.53
SMC4-227ENST00000497984 APOBEC2Q9Y235 224 aaKnown RBP5.51□□□□□ -1.53
SMC4-227ENST00000497984 MYADML2A6NDP7 307 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 PCSK1P29120 753 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 MCAMP43121 646 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 SLC6A9P48067 706 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 PER3P56645 1201 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 SEPT2Q15019 361 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 ANO4Q32M45 955 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 FAM180AQ6UWF9 173 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 STRA8Q7Z7C7 330 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 THNSL2Q86YJ6 484 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 PTCD3Q96EY7 689 aaKnown RBP5.5□□□□□ -1.53
SMC4-227ENST00000497984 ACE2Q9BYF1 805 aaPredicted RBP5.5□□□□□ -1.53
SMC4-227ENST00000497984 VTA1Q9NP79 307 aa5.5□□□□□ -1.53
SMC4-227ENST00000497984 HSFX1Q9UBD0 423 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms