RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 SLC5A3P53794 718 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 SRSF2Q01130 221 aaKnown RBP4.33□□□□□ -1.72
PSPC1-205ENST00000497722 ANO4Q32M45 955 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.33□□□□□ -1.72
PSPC1-205ENST00000497722 FAM193BQ96PV7 902 aaPredicted RBP4.33□□□□□ -1.72
PSPC1-205ENST00000497722 ACE2Q9BYF1 805 aaPredicted RBP4.33□□□□□ -1.72
PSPC1-205ENST00000497722 PRDM13Q9H4Q3 707 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 KLHL33A6NCF5 533 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 AKR1B10O60218 316 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 CFIP05156 583 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 EGR2P11161 476 aaPredicted RBP4.32□□□□□ -1.72
PSPC1-205ENST00000497722 ADSLP30566 484 aaPredicted RBP4.32□□□□□ -1.72
PSPC1-205ENST00000497722 MTNR1BP49286 362 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 CLK3P49761 638 aaKnown RBP4.32□□□□□ -1.72
PSPC1-205ENST00000497722 CHN2P52757 468 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 CLRN1P58418 232 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 FOXI1Q12951 378 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 SP140Q13342 867 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 ODR4Q5SWX8 454 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 EFCAB2Q5VUJ9 269 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 OLFML1Q6UWY5 402 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 RHOT2Q8IXI1 618 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 PPM1NQ8N819 430 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 CPEB3Q8NE35 698 aaKnown RBP4.32□□□□□ -1.72
PSPC1-205ENST00000497722 ZFP28Q8NHY6 868 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 FATE1Q969F0 183 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 COQ10AQ96MF6 247 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 ADI1Q9BV57 179 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 GREM2Q9H772 168 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 IFT122Q9HBG6 1241 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 CCM2LQ9NUG4 571 aaPredicted RBP4.32□□□□□ -1.72
PSPC1-205ENST00000497722 TYW1Q9NV66 732 aaKnown RBP4.32□□□□□ -1.72
PSPC1-205ENST00000497722 TCEAL9Q9UHQ7 104 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 SAP30BPQ9UHR5 308 aaKnown RBP4.32□□□□□ -1.72
PSPC1-205ENST00000497722 DNM3Q9UQ16 869 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 SIK3Q9Y2K2 1263 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 SPEF1Q9Y4P9 236 aa4.32□□□□□ -1.72
PSPC1-205ENST00000497722 K7ESF4 209 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 SPDEFO95238 335 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 SNRPA1P09661 255 aaKnown RBP4.31□□□□□ -1.72
PSPC1-205ENST00000497722 MCAMP43121 646 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 SLC6A9P48067 706 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 SEC24CP53992 1094 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 PER3P56645 1201 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 ERVK-21P61565 698 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 TP53BP2Q13625 1128 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 SEPT2Q15019 361 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 ATXN7L2Q5T6C5 722 aaPredicted RBP4.31□□□□□ -1.72
PSPC1-205ENST00000497722 B3GNTL1Q67FW5 361 aaPredicted RBP4.31□□□□□ -1.72
PSPC1-205ENST00000497722 ASB10Q8WXI3 467 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 FUBP3Q96I24 572 aaKnown RBP eCLIP4.31□□□□□ -1.72
PSPC1-205ENST00000497722 FAXDC2Q96IV6 333 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 PUS7Q96PZ0 661 aaKnown RBP4.31□□□□□ -1.72
PSPC1-205ENST00000497722 RBM12Q9NTZ6 932 aaKnown RBP4.31□□□□□ -1.72
PSPC1-205ENST00000497722 KLHL11Q9NVR0 708 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 POGKQ9P215 609 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 USP15Q9Y4E8 981 aaPredicted RBP4.31□□□□□ -1.72
PSPC1-205ENST00000497722 GPR45Q9Y5Y3 372 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 FPGT-TNNI3KV9GXZ4 949 aa4.31□□□□□ -1.72
PSPC1-205ENST00000497722 CCDC78A2IDD5 438 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 ALDH1L1O75891 902 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 DDX6P26196 483 aaKnown RBP eCLIP4.3□□□□□ -1.72
PSPC1-205ENST00000497722 PTPN7P35236 360 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 SLC16A1P53985 500 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 GUCY1B3Q02153 619 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 MUM1L1Q5H9M0 696 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 GJC2Q5T442 439 aaPredicted RBP4.3□□□□□ -1.72
PSPC1-205ENST00000497722 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 AFMIDQ63HM1 303 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 OTUD7BQ6GQQ9 843 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 BHLHA9Q7RTU4 235 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 C1orf162Q8NEQ5 155 aaPredicted RBP4.3□□□□□ -1.72
PSPC1-205ENST00000497722 OR56A1Q8NGH5 318 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 BBC3Q96PG8 261 aaPredicted RBP4.3□□□□□ -1.72
PSPC1-205ENST00000497722 SLC2A13Q96QE2 648 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 UHRF1Q96T88 793 aaPredicted RBP4.3□□□□□ -1.72
PSPC1-205ENST00000497722 ASPSCR1Q9BZE9 553 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 CYP4F11Q9HBI6 524 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 DMRT3Q9NQL9 472 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 SLC23A1Q9UHI7 598 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 G3BP2Q9UN86 482 aaKnown RBP4.3□□□□□ -1.72
PSPC1-205ENST00000497722 MAP3K2Q9Y2U5 619 aa4.3□□□□□ -1.72
PSPC1-205ENST00000497722 LUC7L2Q9Y383 392 aaKnown RBP4.3□□□□□ -1.72
PSPC1-205ENST00000497722 UNC119BA6NIH7 251 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 GABRDO14764 452 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 IL33O95760 270 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 SPATA31D3P0C874 917 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 ECHS1P30084 290 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 MPLP40238 635 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 NEK2P51955 445 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 KRTAP10-11P60412 298 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 MGAT2Q10469 447 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 MALLQ13021 153 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 RESTQ13127 1097 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 NOMO1Q15155 1222 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 CCDC142Q17RM4 750 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 ARMC6Q6NXE6 501 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 SPATA31D4Q6ZUB0 917 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 MIER2Q8N344 545 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 TMEM132CQ8N3T6 1108 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms