RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 PLA2G5P39877 138 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 MCAMP43121 646 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 SCAND1P57086 179 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 FAPQ12884 760 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 MALLQ13021 153 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 HNRNPA0Q13151 305 aaKnown RBP4.85□□□□□ -1.63
CBX3-208ENST00000497498 UBXN2BQ14CS0 331 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 SLC44A3Q8N4M1 653 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 CASKIN2Q8WXE0 1202 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 UHRF1Q96T88 793 aaPredicted RBP4.85□□□□□ -1.63
CBX3-208ENST00000497498 ZSWIM1Q9BR11 485 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 ACE2Q9BYF1 805 aaPredicted RBP4.85□□□□□ -1.63
CBX3-208ENST00000497498 DMRT3Q9NQL9 472 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 ADARB2Q9NS39 739 aaKnown RBP4.85□□□□□ -1.63
CBX3-208ENST00000497498 LANCL2Q9NS86 450 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 SLC23A1Q9UHI7 598 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 SIK3Q9Y2K2 1263 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 NOX1Q9Y5S8 564 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 SALL3Q9BXA9 1300 aa4.85□□□□□ -1.63
CBX3-208ENST00000497498 SPATA31A6Q5VVP1 1343 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 CCDC78A2IDD5 438 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 ENDOD1O94919 500 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 EYA4O95677 639 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 RAP2AP10114 183 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 FGFR4P22455 802 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 GPR3P46089 330 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 ALDH1A3P47895 512 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 PTH2RP49190 550 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 PER3P56645 1201 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 CXADRP78310 365 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 STAT4Q14765 748 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 SEM1Q6ZVN7 128 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 STON2Q8WXE9 905 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 NELL1Q92832 810 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 Q96MF0 132 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 GALNT9Q9HCQ5 603 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 KCNE5Q9UJ90 142 aa4.84□□□□□ -1.63
CBX3-208ENST00000497498 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 PRSS23O95084 383 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 ZNF37AP17032 561 aaPredicted RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 FPR1P21462 350 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 SLC6A2P23975 617 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 SLC6A9P48067 706 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 MTNR1BP49286 362 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 ELLP55199 621 aaPredicted RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 SRSF2Q01130 221 aaKnown RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 MGAT2Q10469 447 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 ZNF169Q14929 603 aaPredicted RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 SEPT2Q15019 361 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 NOMO1Q15155 1222 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 ZNF362Q5T0B9 420 aaPredicted RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 Q6ZNX1 250 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.83□□□□□ -1.64
CBX3-208ENST00000497498 CAGE1Q8TC20 777 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 CHAC2Q8WUX2 184 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 NACC2Q96BF6 587 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 CYFIP2Q96F07 1278 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 LRFN3Q9BTN0 628 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 SENP6Q9GZR1 1112 aaPredicted RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 LDAHQ9H6V9 325 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 FBXO34Q9NWN3 711 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 C14orf119Q9NWQ9 140 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 TESQ9UGI8 421 aaKnown RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 AJAP1Q9UKB5 411 aaPredicted RBP4.83□□□□□ -1.64
CBX3-208ENST00000497498 TLK1Q9UKI8 766 aa4.83□□□□□ -1.64
CBX3-208ENST00000497498 ARHGEF17Q96PE2 2063 aaPredicted RBP4.82□□□□□ -1.64
CBX3-208ENST00000497498 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 TEX33O43247 280 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 GSPT1P15170 499 aaKnown RBP4.82□□□□□ -1.64
CBX3-208ENST00000497498 HSD3B2P26439 372 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 PCSK1P29120 753 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 MASP1P48740 699 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 RARRES1P49788 294 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 SLC5A3P53794 718 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 SIM1P81133 766 aaPredicted RBP4.82□□□□□ -1.64
CBX3-208ENST00000497498 CYP2A13Q16696 494 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 LRCH2Q5VUJ6 765 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 ZNF529Q6P280 563 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 RNF31Q96EP0 1072 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 MYOCQ99972 504 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 ADI1Q9BV57 179 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 SLKQ9H2G2 1235 aaPredicted RBP4.82□□□□□ -1.64
CBX3-208ENST00000497498 TMEM140Q9NV12 185 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 TBCCD1Q9NVR7 557 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 ZBTB21Q9ULJ3 1066 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 ACTL7AQ9Y615 435 aa4.82□□□□□ -1.64
CBX3-208ENST00000497498 AATKQ6ZMQ8 1374 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 GPANK1O95872 356 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 CKBP12277 381 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 LMO1P25800 156 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 HSD11B2P80365 405 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 ZKSCAN2Q63HK3 967 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 BOLLQ8N9W6 283 aaKnown RBP4.81□□□□□ -1.64
CBX3-208ENST00000497498 AHCYL2Q96HN2 611 aaKnown RBP4.81□□□□□ -1.64
CBX3-208ENST00000497498 DUSP26Q9BV47 211 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 RSAD1Q9HA92 442 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 CCM2LQ9NUG4 571 aaPredicted RBP4.81□□□□□ -1.64
CBX3-208ENST00000497498 DNAJC28Q9NX36 388 aa4.81□□□□□ -1.64
CBX3-208ENST00000497498 FOXJ2Q9P0K8 574 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms