RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 IQSEC1Q6DN90 963 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 GGT6Q6P531 493 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 CFAP161Q6P656 301 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 CNKSR3Q6P9H4 555 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 CHST15Q7LFX5 561 aaPredicted RBP4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 MAATS1Q7Z4T9 603 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 BCL6BQ8N143 479 aaPredicted RBP4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 TTLL6Q8N841 843 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 SNRNP27Q8WVK2 155 aaKnown RBP4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 ZBTB8AQ96BR9 441 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 PWWP2AQ96N64 755 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 MYD88Q99836 296 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 LRFN3Q9BTN0 628 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 HAPLN2Q9GZV7 340 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 PCIF1Q9H4Z3 704 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 RSAD1Q9HA92 442 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 UCKL1Q9NWZ5 548 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 GALNT8Q9NY28 637 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 ZFP69BQ9UJL9 534 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 NOL7Q9UMY1 257 aaKnown RBP4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 UBR1Q8IWV7 1749 aa4.37□□□□□ -1.71
EXOSC3-208ENST00000496910 DCHS1Q96JQ0 3298 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 A0A1B0GTL3 188 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 A6NCN8 305 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 FIBPO43427 364 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDHGA12O60330 932 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 KLHL18O94889 574 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 MYBP10242 640 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 ZKSCAN1P17029 563 aaPredicted RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 RHCEP18577 417 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 RPL13P26373 211 aaKnown RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 DDIT3P35638 169 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 RHDQ02161 417 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 DDB1Q16531 1140 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 EP400NLQ6ZTU2 488 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 KRT77Q7Z794 578 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 RASSF3Q86WH2 238 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 LYSMD2Q8IV50 215 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 SLC41A1Q8IVJ1 513 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 CMIPQ8IY22 773 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 ADGRG2Q8IZP9 1017 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 STPG3Q8N7X2 389 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 C1orf162Q8NEQ5 155 aaPredicted RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 IL17REQ8NFR9 667 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 HSPBAP1Q96EW2 488 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 FAXDC2Q96IV6 333 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 MAML3Q96JK9 1138 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 SGCZQ96LD1 299 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 ORAI2Q96SN7 254 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 TACO1Q9BSH4 297 aaKnown RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 CRB3Q9BUF7 120 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 BTBD2Q9BX70 525 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 ZDHHC5Q9C0B5 715 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 CSRNP2Q9H175 543 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 ALDH8A1Q9H2A2 487 aaPredicted RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PRDM12Q9H4Q4 367 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 TOPORSQ9NS56 1045 aaPredicted RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 TRMT13Q9NUP7 481 aaKnown RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 ARHGAP20Q9P2F6 1191 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 ARHGAP28Q9P2N2 729 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 TMPRSS11EQ9UL52 423 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 CNOT6Q9ULM6 557 aaKnown RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDHGA9Q9Y5G4 932 aaKnown RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDHGA8Q9Y5G5 932 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDHGA7Q9Y5G6 932 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDHGA6Q9Y5G7 932 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDHGA3Q9Y5H0 932 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PCDHGA2Q9Y5H1 932 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 FAM208BQ5VWN6 2430 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 PLEKHG2Q9H7P9 1386 aa4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 GCN1Q92616 2671 aaKnown RBP4.36□□□□□ -1.71
EXOSC3-208ENST00000496910 LAMC1P11047 1609 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 KIDINS220Q9ULH0 1771 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 J3KRW8 73 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 CA12O43570 354 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 ZRANB2O95218 330 aaKnown RBP eCLIP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 CHGBP05060 677 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 VEGFAP15692 232 aaPredicted RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 CD40P25942 277 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 LSP1P33241 339 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 RAP1GAPP47736 663 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 GLRBP48167 497 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 TM4SF4P48230 202 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 RGS3P49796 1198 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 SESN3P58005 492 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 KLF1Q13351 362 aaPredicted RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 SART3Q15020 963 aaKnown RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 ARMC3Q5W041 872 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 UNQ6494/PRO21346Q6UXR6 183 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 C1orf122Q6ZSJ8 110 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 CXorf67Q86X51 503 aaPredicted RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 ZZZ3Q8IYH5 903 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 FAM43AQ8N2R8 423 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 HIPK4Q8NE63 616 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 SLC35G2Q8TBE7 412 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 MBD6Q96DN6 1003 aa4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 YTHDC1Q96MU7 727 aaKnown RBP4.35□□□□□ -1.71
EXOSC3-208ENST00000496910 TAAR9Q96RI9 348 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms