RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 COL4A3Q01955 1670 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 KLHL33A6NCF5 533 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 SGTAO43765 313 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 NDUFA10O95299 355 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 GCP02774 474 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 AMY1AP04745 511 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 ALAS1P13196 640 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 GCSHP23434 173 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 DDX6P26196 483 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRIM4-205ENST00000496896 PCSK1P29120 753 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 CDKN1CP49918 316 aaPredicted RBP5.68□□□□□ -1.5
TRIM4-205ENST00000496896 SLC16A1P53985 500 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 ATP2B3Q16720 1220 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 PRPF38AQ8NAV1 312 aaKnown RBP5.68□□□□□ -1.5
TRIM4-205ENST00000496896 CPEB3Q8NE35 698 aaKnown RBP5.68□□□□□ -1.5
TRIM4-205ENST00000496896 OR56A1Q8NGH5 318 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 JADE3Q92613 823 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 COQ10AQ96MF6 247 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 SLC2A13Q96QE2 648 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 AGAP2Q99490 1192 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 SLC13A1Q9BZW2 595 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 TRHDEQ9UKU6 1024 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 MRFAP1Q9Y605 127 aa5.68□□□□□ -1.5
TRIM4-205ENST00000496896 SHTN1A0MZ66 631 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 FZD9O00144 591 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 NDUFS2O75306 463 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 DDCP20711 480 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 FPR1P21462 350 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 ZEB1P37275 1124 aaPredicted RBP5.67□□□□□ -1.5
TRIM4-205ENST00000496896 RAP2BP61225 183 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 GUCY1B3Q02153 619 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 COL10A1Q03692 680 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 CLUL1Q15846 466 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 ABHD17BQ5VST6 288 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 MED25Q71SY5 747 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 MIGA2Q7L4E1 593 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 VRK3Q8IV63 474 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 FAM43AQ8N2R8 423 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 NRG4Q8WWG1 115 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 NAF1Q96HR8 494 aaKnown RBP5.67□□□□□ -1.5
TRIM4-205ENST00000496896 TEX101Q9BY14 249 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 BRINP2Q9C0B6 783 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 RNPEPQ9H4A4 650 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 LDAHQ9H6V9 325 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 TUBD1Q9UJT1 453 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 SPEF1Q9Y4P9 236 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 ACTL7AQ9Y615 435 aa5.67□□□□□ -1.5
TRIM4-205ENST00000496896 PIPSLA2A3N6 862 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 GABRDO14764 452 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 LPXNO60711 386 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 AVPR1BP47901 424 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 CTXN1P60606 82 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 CDC42EP1Q00587 391 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 ZNF529Q6P280 563 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 Q6YL49 198 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 MAPKAPK5Q8IW41 473 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 FBXO18Q8NFZ0 1043 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 NLGN4YQ8NFZ3 816 aaPredicted RBP5.66□□□□□ -1.5
TRIM4-205ENST00000496896 ZCRB1Q8TBF4 217 aaKnown RBP5.66□□□□□ -1.5
TRIM4-205ENST00000496896 CCHCR1Q8TD31 782 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 STON2Q8WXE9 905 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 HDAC10Q969S8 669 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 ADAM2Q99965 735 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 TMEM74BQ9NUR3 256 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 SYBUQ9NX95 663 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
TRIM4-205ENST00000496896 MYBBP1AQ9BQG0 1328 aaKnown RBP5.66□□□□□ -1.5
TRIM4-205ENST00000496896 A0A1B0GTW7 788 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PCDHGA12O60330 932 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PPFIA2O75334 1257 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 CDKL5O76039 1030 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 C5AR1P21730 350 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PROZP22891 400 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 USP14P54578 494 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 ITKQ08881 620 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 SPDYE7PQ495Y7 208 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 TSHZ3Q63HK5 1081 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 DNAJC10Q8IXB1 793 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 TMEM132CQ8N3T6 1108 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 ZGPATQ8N5A5 531 aaKnown RBP5.65□□□□□ -1.5
TRIM4-205ENST00000496896 NUP133Q8WUM0 1156 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 LINC00476Q8WZB0 136 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 DPF2Q92785 391 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 BOD1Q96IK1 185 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 CYP4F11Q9HBI6 524 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 FBXO34Q9NWN3 711 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 KCNE5Q9UJ90 142 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 IPPQ9Y573 584 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PCDHGA9Q9Y5G4 932 aaKnown RBP5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PCDHGA8Q9Y5G5 932 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PCDHGA7Q9Y5G6 932 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PCDHGA6Q9Y5G7 932 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 PCDHGA3Q9Y5H0 932 aa5.65□□□□□ -1.5
TRIM4-205ENST00000496896 MT-CO1P00395 513 aa5.64□□□□□ -1.51
TRIM4-205ENST00000496896 FOSP01100 380 aaPredicted RBP5.64□□□□□ -1.51
TRIM4-205ENST00000496896 ELANEP08246 267 aa5.64□□□□□ -1.51
TRIM4-205ENST00000496896 MYBL2P10244 700 aa5.64□□□□□ -1.51
TRIM4-205ENST00000496896 EGR2P11161 476 aaPredicted RBP5.64□□□□□ -1.51
TRIM4-205ENST00000496896 CKBP12277 381 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms