RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 TMEM189-UBE2V1I3L0A0 370 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 CXCL8P10145 99 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 TKTP29401 623 aaKnown RBP21.35■■□□□ 1.01
COL20A1-208ENST00000496810 NMT1P30419 496 aaKnown RBP21.35■■□□□ 1.01
COL20A1-208ENST00000496810 TNFSF9P41273 254 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 YARSP54577 528 aaKnown RBP21.35■■□□□ 1.01
COL20A1-208ENST00000496810 ZXDAP98168 799 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 SPAG1Q07617 926 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 MCL1Q07820 350 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 PTPN21Q16825 1174 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 SLC10A6Q3KNW5 377 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 FOXD4L5Q5VV16 416 aaPredicted RBP21.35■■□□□ 1.01
COL20A1-208ENST00000496810 SLC39A4Q6P5W5 647 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 LILRA6Q6PI73 481 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 MYCT1Q8N699 235 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 FOXD4L4Q8WXT5 416 aaPredicted RBP21.35■■□□□ 1.01
COL20A1-208ENST00000496810 CLSTN3Q9BQT9 956 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 IKZF4Q9H2S9 585 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 ZHX3Q9H4I2 956 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL20A1-208ENST00000496810 TOPORSQ9NS56 1045 aaPredicted RBP21.35■■□□□ 1.01
COL20A1-208ENST00000496810 FNIP2Q9P278 1114 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 TUBGCP4Q9UGJ1 667 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 NR2E1Q9Y466 385 aa21.35■■□□□ 1.01
COL20A1-208ENST00000496810 TSC2P49815 1807 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 TISP43B9A030 160 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 FAM189A1O60320 539 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 N4BP1O75113 896 aaKnown RBP21.34■■□□□ 1.01
COL20A1-208ENST00000496810 KRT18P05783 430 aaKnown RBP21.34■■□□□ 1.01
COL20A1-208ENST00000496810 KCNE1P15382 129 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 FGFR3P22607 806 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 RSPO2Q6UXX9 243 aaPredicted RBP21.34■■□□□ 1.01
COL20A1-208ENST00000496810 GPR65Q8IYL9 337 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 TDRD5Q8NAT2 981 aaKnown RBP21.34■■□□□ 1.01
COL20A1-208ENST00000496810 CMASQ8NFW8 434 aaPredicted RBP21.34■■□□□ 1.01
COL20A1-208ENST00000496810 KCNN1Q92952 543 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 BICD1Q96G01 975 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 TBX20Q9UMR3 447 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 NOTCH4Q99466 2003 aa21.34■■□□□ 1.01
COL20A1-208ENST00000496810 CCDC195A0A1B0GUA6 201 aa21.33■■□□□ 1.01
COL20A1-208ENST00000496810 HNRNPDLO14979 420 aaKnown RBP21.33■■□□□ 1.01
COL20A1-208ENST00000496810 CLDN3O15551 220 aa21.33■■□□□ 1.01
COL20A1-208ENST00000496810 TBCAO75347 108 aaKnown RBP21.33■■□□□ 1.01
COL20A1-208ENST00000496810 ZC2HC1CQ53FD0 456 aaPredicted RBP21.33■■□□□ 1.01
COL20A1-208ENST00000496810 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.33■■□□□ 1.01
COL20A1-208ENST00000496810 C15orf39Q6ZRI6 1047 aa21.33■■□□□ 1.01
COL20A1-208ENST00000496810 TRIM67Q6ZTA4 783 aa21.33■■□□□ 1.01
COL20A1-208ENST00000496810 CCDC149Q6ZUS6 474 aa21.33■■□□□ 1.01
COL20A1-208ENST00000496810 DYMQ7RTS9 669 aa21.33■■□□□ 1.01
COL20A1-208ENST00000496810 DDX27Q96GQ7 796 aaKnown RBP21.33■■□□□ 1.01
COL20A1-208ENST00000496810 FBXW11Q9UKB1 542 aa21.33■■□□□ 1.01
COL20A1-208ENST00000496810 TMEM221A6NGB7 291 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 MYMKA6NI61 221 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 M0R296 226 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 PODXLO00592 558 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 TRAK2O60296 914 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 DDIT3P35638 169 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 MATR3P43243 847 aaKnown RBP eCLIP21.32■■□□□ 1
COL20A1-208ENST00000496810 NASPP49321 788 aaPredicted RBP21.32■■□□□ 1
COL20A1-208ENST00000496810 LIG4P49917 911 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 PKP1Q13835 747 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 SLC39A14Q15043 492 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 DCLRE1AQ6PJP8 1040 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 SFR1Q86XK3 245 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 KREMEN2Q8NCW0 462 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 UROC1Q96N76 676 aa21.32■■□□□ 1
COL20A1-208ENST00000496810 PIGRP01833 764 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 ELAVL2Q12926 359 aaKnown RBP21.31■■□□□ 1
COL20A1-208ENST00000496810 HSCBQ8IWL3 235 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 SMG7Q92540 1137 aaKnown RBP21.31■■□□□ 1
COL20A1-208ENST00000496810 ASIC4Q96FT7 647 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 PANK2Q9BZ23 570 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 SLC38A7Q9NVC3 462 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 MTRRQ9UBK8 725 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 STK17AQ9UEE5 414 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 LIMD1Q9UGP4 676 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 HCN4Q9Y3Q4 1203 aa21.31■■□□□ 1
COL20A1-208ENST00000496810 CLUHO75153 1309 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 SCN1AP35498 2009 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 ANKRD63C9JTQ0 380 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 H0YCG3 227 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 PAPLNO95428 1278 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 GUCY2FP51841 1108 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 CREMQ03060 361 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 ENOX2Q16206 610 aaKnown RBP21.3■■□□□ 1
COL20A1-208ENST00000496810 FOXD4L6Q3SYB3 417 aaPredicted RBP21.3■■□□□ 1
COL20A1-208ENST00000496810 RRAGBQ5VZM2 374 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 FOXD4L3Q6VB84 417 aaPredicted RBP21.3■■□□□ 1
COL20A1-208ENST00000496810 MAP4K3Q8IVH8 894 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 ZDHHC14Q8IZN3 488 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 KRI1Q8N9T8 703 aaKnown RBP21.3■■□□□ 1
COL20A1-208ENST00000496810 LINC00301Q8NCQ3 95 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 DNAJC19Q96DA6 116 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 FGFBP2Q9BYJ0 223 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 ZSCAN16Q9H4T2 348 aaPredicted RBP21.3■■□□□ 1
COL20A1-208ENST00000496810 TFIP11Q9UBB9 837 aaKnown RBP21.3■■□□□ 1
COL20A1-208ENST00000496810 KCNG1Q9UIX4 513 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 USTQ9Y2C2 406 aa21.3■■□□□ 1
COL20A1-208ENST00000496810 MORC2Q9Y6X9 1032 aaPredicted RBP21.3■■□□□ 1
COL20A1-208ENST00000496810 TTC26A0AVF1 554 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms