RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 C8AP07357 584 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 PLA2G4BP0C869 781 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 MCF2P10911 925 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 FGFR3P22607 806 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 TKTP29401 623 aaKnown RBP14.19□□□□□ -0.14
FN1-226ENST00000496542 OR1D2P34982 312 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 SOX4Q06945 474 aaPredicted RBP14.19□□□□□ -0.14
FN1-226ENST00000496542 STRN3Q13033 797 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 UPP1Q16831 310 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 PPM1LQ5SGD2 360 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 HYIQ5T013 277 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 MPZL3Q6UWV2 235 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 C3orf58Q8NDZ4 430 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 ATOH1Q92858 354 aaPredicted RBP14.19□□□□□ -0.14
FN1-226ENST00000496542 SNX27Q96L92 541 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 POLIQ9UNA4 740 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 FAM186AA6NE01 2351 aa14.19□□□□□ -0.14
FN1-226ENST00000496542 PDCD11Q14690 1871 aaKnown RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 NPHP3-ACAD11A0A0J9YXS1 232 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 H0Y858 1186 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 ABLIM1O14639 778 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 CCL16O15467 120 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 TRAPPC3O43617 180 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 PLS3P13797 630 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 PROZP22891 400 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 FSHRP23945 695 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 BRCC3P46736 316 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 MCM2P49736 904 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 NUBP1P53384 320 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 SMTNP53814 917 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 SLC12A3P55017 1021 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 NTHL1P78549 312 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 NOLC1Q14978 699 aaKnown RBP eCLIP14.18□□□□□ -0.141e-323■■□□□ 14.5
FN1-226ENST00000496542 TMEM119Q4V9L6 283 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 LARP1BQ659C4 914 aaKnown RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 ARL6IP4Q66PJ3 421 aaKnown RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 CWF19L1Q69YN2 538 aaKnown RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 CD300LGQ6UXG3 332 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 GRASPQ7Z6J2 395 aaPredicted RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 SIX5Q8N196 739 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 SYT2Q8N9I0 419 aaPredicted RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 ST13P5Q8NFI4 369 aaPredicted RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 SLC7A14Q8TBB6 771 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 SPIRE2Q8WWL2 714 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 ZBTB45Q96K62 511 aaPredicted RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 ZMAT2Q96NC0 199 aaKnown RBP14.18□□□□□ -0.14
FN1-226ENST00000496542 ACAP3Q96P50 834 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 SLC38A7Q9NVC3 462 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.18□□□□□ -0.14
FN1-226ENST00000496542 MTRRQ9UBK8 725 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 CDY1Q9Y6F8 540 aa14.18□□□□□ -0.14
FN1-226ENST00000496542 PODXLO00592 558 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 XYLBO75191 536 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 CFHP08603 1231 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 HNRNPA1P09651 372 aaKnown RBP eCLIP14.17□□□□□ -0.14
FN1-226ENST00000496542 MAPTP10636 758 aaKnown RBP14.17□□□□□ -0.14
FN1-226ENST00000496542 LAMP2P13473 410 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 MATR3P43243 847 aaKnown RBP eCLIP14.17□□□□□ -0.14
FN1-226ENST00000496542 RAB33AQ14088 237 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 XKR4Q5GH76 650 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
FN1-226ENST00000496542 ALKAL1Q6UXT8 129 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 RSPO2Q6UXX9 243 aaPredicted RBP14.17□□□□□ -0.14
FN1-226ENST00000496542 TMEM161BQ8NDZ6 487 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 C18orf25Q96B23 403 aaPredicted RBP14.17□□□□□ -0.14
FN1-226ENST00000496542 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
FN1-226ENST00000496542 TBC1D32Q96NH3 1257 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 IRF2BPLQ9H1B7 796 aa14.17□□□□□ -0.14
FN1-226ENST00000496542 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.17□□□□□ -0.14
FN1-226ENST00000496542 MYH15Q9Y2K3 1946 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 USP34Q70CQ2 3546 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 NOTCH4Q99466 2003 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 TOM1L1O75674 476 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 KCNE1P15382 129 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 NPR3P17342 541 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 RFX1P22670 979 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 HOXA9P31269 272 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 CLCN5P51795 746 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 HTR4Q13639 388 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 DHX8Q14562 1220 aaKnown RBP14.16□□□□□ -0.14
FN1-226ENST00000496542 SEZ6Q53EL9 994 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 ANKS3Q6ZW76 656 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 GPBP1Q86WP2 473 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 SLC44A3Q8N4M1 653 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 KCTD17Q8N5Z5 321 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 RASSF8Q8NHQ8 419 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 NXPE3Q969Y0 559 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 BICD1Q96G01 975 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 NTPCRQ9BSD7 190 aaKnown RBP14.16□□□□□ -0.14
FN1-226ENST00000496542 KCND2Q9NZV8 630 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 CNTN3Q9P232 1028 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 CA14Q9ULX7 337 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 NUB1Q9Y5A7 615 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 BACE2Q9Y5Z0 518 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 NUMBLQ9Y6R0 609 aa14.16□□□□□ -0.14
FN1-226ENST00000496542 STK25O00506 426 aa14.15□□□□□ -0.14
FN1-226ENST00000496542 MEFVO15553 781 aaPredicted RBP14.15□□□□□ -0.14
FN1-226ENST00000496542 SRFP11831 508 aa14.15□□□□□ -0.14
FN1-226ENST00000496542 AOC1P19801 751 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms