RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 MARCKSP29966 332 aaPredicted RBP17.19■□□□□ 0.34
HDAC4-213ENST00000496347 CLCNKBP51801 687 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 OSTNP61366 133 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 PSMD5Q16401 504 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 KYAT1Q16773 422 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 DCLRE1AQ6PJP8 1040 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 EPSTI1Q96J88 318 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 ZDHHC7Q9NXF8 308 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 MYO10Q9HD67 2058 aa17.19■□□□□ 0.34
HDAC4-213ENST00000496347 TGM5O43548 720 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 FGFR3P22607 806 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-213ENST00000496347 LIG4P49917 911 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 ZXDAP98168 799 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 MTMR3Q13615 1198 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 DHX8Q14562 1220 aaKnown RBP17.18■□□□□ 0.34
HDAC4-213ENST00000496347 FAM173BQ6P4H8 233 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 PRSS55Q6UWB4 352 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-213ENST00000496347 OTOP3Q7RTS5 596 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 ZDHHC14Q8IZN3 488 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 KRI1Q8N9T8 703 aaKnown RBP17.18■□□□□ 0.34
HDAC4-213ENST00000496347 USP28Q96RU2 1077 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 FBXW11Q9UKB1 542 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 TBX20Q9UMR3 447 aa17.18■□□□□ 0.34
HDAC4-213ENST00000496347 TRAK2O60296 914 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 ANK1P16157 1881 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 RPL17P18621 184 aaKnown RBP17.17■□□□□ 0.34
HDAC4-213ENST00000496347 RPL9P32969 192 aaKnown RBP17.17■□□□□ 0.34
HDAC4-213ENST00000496347 DDIT3P35638 169 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 SOX4Q06945 474 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-213ENST00000496347 SIGLEC14Q08ET2 396 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 SLC39A14Q15043 492 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 KANK3Q6NY19 840 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 CCDC73Q6ZRK6 1079 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 TRIM67Q6ZTA4 783 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 MAP4K3Q8IVH8 894 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 PLCD3Q8N3E9 789 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 C3orf58Q8NDZ4 430 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 LNX1Q8TBB1 728 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-213ENST00000496347 STAMQ92783 540 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 ACSF2Q96CM8 615 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-213ENST00000496347 ZMAT2Q96NC0 199 aaKnown RBP17.17■□□□□ 0.34
HDAC4-213ENST00000496347 ST6GALNAC4Q9H4F1 302 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 PLEKHA5Q9HAU0 1116 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 GOLGA2P5Q9HBQ8 144 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 CLUHO75153 1309 aa17.17■□□□□ 0.34
HDAC4-213ENST00000496347 KMT2EQ8IZD2 1858 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 PODXLO00592 558 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 CLTAP09496 248 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 CXCL8P10145 99 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.343e-7■□□□□ 8.1
HDAC4-213ENST00000496347 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
HDAC4-213ENST00000496347 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 LIN9Q5TKA1 542 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 LILRA6Q6PI73 481 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 HFE2Q6ZVN8 426 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 ANKS3Q6ZW76 656 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 USP49Q70CQ1 688 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 CEP57Q86XR8 500 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 PALB2Q86YC2 1186 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 UBALD2Q8IYN6 164 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 HVCN1Q96D96 273 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 ZBTB45Q96K62 511 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-213ENST00000496347 FIZ1Q96SL8 496 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 WDR6Q9NNW5 1121 aaKnown RBP17.16■□□□□ 0.34
HDAC4-213ENST00000496347 MTRRQ9UBK8 725 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 SEL1LQ9UBV2 794 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 SORCS3Q9UPU3 1222 aa17.16■□□□□ 0.34
HDAC4-213ENST00000496347 CACNA1HO95180 2353 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 CCDC195A0A1B0GUA6 201 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 TMEM221A6NGB7 291 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 M0R296 226 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 SYN3O14994 580 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-213ENST00000496347 FAM189A1O60320 539 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 RFPL2O75678 378 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 HSP90AA1P07900 732 aaKnown RBP17.15■□□□□ 0.34
HDAC4-213ENST00000496347 HOXA9P31269 272 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 GTF2BQ00403 316 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 SLC10A6Q3KNW5 377 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 CD300LGQ6UXG3 332 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 BMP8AQ7Z5Y6 402 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 GLYCTKQ8IVS8 523 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 KREMEN2Q8NCW0 462 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 SMG7Q92540 1137 aaKnown RBP17.15■□□□□ 0.34
HDAC4-213ENST00000496347 ZNF707Q96C28 371 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-213ENST00000496347 MFSD14AQ96MC6 490 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 TSPAN18Q96SJ8 248 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 CLSTN3Q9BQT9 956 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 ZHX3Q9H4I2 956 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 RAPGEFL1Q9UHV5 662 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 BACE2Q9Y5Z0 518 aa17.15■□□□□ 0.34
HDAC4-213ENST00000496347 OGTO15294 1046 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 ZMYND10O75800 440 aa17.14■□□□□ 0.33
HDAC4-213ENST00000496347 POU2F2P09086 479 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms