RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TNNC2P02585 160 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 PRKCBP05771 671 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 HOXC6P09630 235 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 GZMAP12544 262 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 KRT5P13647 590 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 GLRA2P23416 452 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 MAPK4P31152 587 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 ARL2P36404 184 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 TNNT3P45378 269 aaPredicted RBP7.44□□□□□ -1.22
USP39-219ENST00000496047 PHKA2P46019 1235 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
USP39-219ENST00000496047 FAM193AP78312 1265 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 SP2Q02086 613 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 PPP3CAQ08209 521 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 C2orf54Q08AI8 447 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 LY6KQ17RY6 165 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 SEL1L2Q5TEA6 688 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 MEI1Q5TIA1 1274 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 NFRKBQ6P4R8 1299 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 GJB7Q6PEY0 223 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 TRIM72Q6ZMU5 477 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 ARMCX2Q7L311 632 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 GLYCTKQ8IVS8 523 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 FBXO16Q8IX29 292 aaPredicted RBP7.44□□□□□ -1.22
USP39-219ENST00000496047 ANKRD13CQ8N6S4 541 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 UBL4BQ8N7F7 174 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 LRRN4CLQ8ND94 238 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 ASAP3Q8TDY4 903 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 BSNDQ8WZ55 320 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 TMEM143Q96AN5 459 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 ANKRD36BP1Q96IX9 119 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 RUFY1Q96T51 708 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 GPR20Q99678 358 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 TCHPQ9BT92 498 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 BCAS3Q9H6U6 928 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 PRMT7Q9NVM4 692 aaPredicted RBP7.44□□□□□ -1.22
USP39-219ENST00000496047 SUCLA2Q9P2R7 463 aaPredicted RBP7.44□□□□□ -1.22
USP39-219ENST00000496047 RBPJLQ9UBG7 517 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 HDAC6Q9UBN7 1215 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 LCMT1Q9UIC8 334 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 TFR2Q9UP52 801 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 STYXL1Q9Y6J8 313 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 DUSP10Q9Y6W6 482 aa7.44□□□□□ -1.22
USP39-219ENST00000496047 TDRD15B5MCY1 1934 aaKnown RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 DDX3XO00571 662 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP39-219ENST00000496047 KCNK3O14649 394 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 OGTO15294 1046 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 ZEB2O60315 1214 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 SRGAP2O75044 1071 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 TOM1L1O75674 476 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 IL18RAPO95256 599 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 FTCDO95954 541 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 ABL1P00519 1130 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 PGK2P07205 417 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 TMEM191BP0C7N4 346 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 PNMA6AP0CW24 399 aaPredicted RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 MYBL1P10243 752 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 HARSP12081 509 aaKnown RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 ABCB4P21439 1286 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 MARK3P27448 753 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 GALCP54803 685 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 HADHBP55084 474 aaKnown RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 GPC5P78333 572 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 DLG4P78352 724 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 APBA1Q02410 837 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 GABPB1Q06547 395 aaPredicted RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 PAK2Q13177 524 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 TRPC3Q13507 836 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 IRF5Q13568 498 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 CAPSQ13938 189 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 TARBP2Q15633 366 aaKnown RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 LONRF2Q1L5Z9 754 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 FAM110CQ1W6H9 321 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 LIN9Q5TKA1 542 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 CDCA2Q69YH5 1023 aaPredicted RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 ZNF787Q6DD87 383 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 PHLDB3Q6NSJ2 640 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 GPAT2Q6NUI2 795 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 C11orf63Q6NUN7 778 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 DPY19L2P1Q6NXN4 242 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 MOB2Q70IA6 237 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 DPP9Q86TI2 863 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 WDR49Q8IV35 697 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 ARHGEF19Q8IW93 802 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 BRSK2Q8IWQ3 736 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 IFT20Q8IY31 132 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 RPUSD2Q8IZ73 545 aaKnown RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 MSL3Q8N5Y2 521 aaKnown RBP7.43□□□□□ -1.22
USP39-219ENST00000496047 SPATA4Q8NEY3 305 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 TPCN2Q8NHX9 752 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 CCDC26Q8TAB7 109 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 SHC3Q92529 594 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 PKNOX2Q96KN3 472 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 RUNDC3BQ96NL0 473 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 SCLT1Q96NL6 688 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 MMS19Q96T76 1030 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 ADPGKQ9BRR6 497 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 DNAI2Q9GZS0 605 aa7.43□□□□□ -1.22
USP39-219ENST00000496047 IKZF4Q9H2S9 585 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms