RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SIGLEC14Q08ET2 396 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 DHX8Q14562 1220 aaKnown RBP26.49■■□□□ 1.83
HLA-C-209ENST00000495835 PSMD5Q16401 504 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 PALB2Q86YC2 1186 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 LRRC15Q8TF66 581 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 HASPINQ8TF76 798 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 EPSTI1Q96J88 318 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 ZBTB45Q96K62 511 aaPredicted RBP26.49■■□□□ 1.83
HLA-C-209ENST00000495835 KCNH6Q9H252 994 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 PLEKHA5Q9HAU0 1116 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 C2orf16Q68DN1 1984 aa26.49■■□□□ 1.83
HLA-C-209ENST00000495835 TRAK2O60296 914 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 PIGRP01833 764 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 MARCKSP29966 332 aaPredicted RBP26.48■■□□□ 1.83
HLA-C-209ENST00000495835 CACNB1Q02641 598 aaPredicted RBP26.48■■□□□ 1.83
HLA-C-209ENST00000495835 SLC39A14Q15043 492 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 CEP57Q86XR8 500 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 UBALD2Q8IYN6 164 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 TSPAN18Q96SJ8 248 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 CLSTN3Q9BQT9 956 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 TBX20Q9UMR3 447 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 SORCS3Q9UPU3 1222 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 MYO10Q9HD67 2058 aa26.48■■□□□ 1.83
HLA-C-209ENST00000495835 TBCAO75347 108 aaKnown RBP26.47■■□□□ 1.83
HLA-C-209ENST00000495835 CLTAP09496 248 aa26.47■■□□□ 1.83
HLA-C-209ENST00000495835 PRSS55Q6UWB4 352 aaPredicted RBP26.47■■□□□ 1.83
HLA-C-209ENST00000495835 RTL10Q7L3V2 364 aa26.47■■□□□ 1.83
HLA-C-209ENST00000495835 KRI1Q8N9T8 703 aaKnown RBP26.47■■□□□ 1.83
HLA-C-209ENST00000495835 KREMEN2Q8NCW0 462 aa26.47■■□□□ 1.83
HLA-C-209ENST00000495835 STAMQ92783 540 aa26.47■■□□□ 1.83
HLA-C-209ENST00000495835 ST6GALNAC4Q9H4F1 302 aa26.47■■□□□ 1.83
HLA-C-209ENST00000495835 WDR6Q9NNW5 1121 aaKnown RBP26.47■■□□□ 1.83
HLA-C-209ENST00000495835 ANKFY1Q9P2R3 1169 aa26.47■■□□□ 1.83
HLA-C-209ENST00000495835 VWA8A3KMH1 1905 aa26.47■■□□□ 1.83
HLA-C-209ENST00000495835 TMEM221A6NGB7 291 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 M0R296 226 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 GTF2BQ00403 316 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 SLC10A6Q3KNW5 377 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 CD300LGQ6UXG3 332 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 HFE2Q6ZVN8 426 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 BICD1Q96G01 975 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 ZMAT2Q96NC0 199 aaKnown RBP26.46■■□□□ 1.83
HLA-C-209ENST00000495835 RAPGEFL1Q9UHV5 662 aa26.46■■□□□ 1.83
HLA-C-209ENST00000495835 PDCD11Q14690 1871 aaKnown RBP26.46■■□□□ 1.83
HLA-C-209ENST00000495835 ZMYND10O75800 440 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 RPL17P18621 184 aaKnown RBP26.45■■□□□ 1.82
HLA-C-209ENST00000495835 SP100P23497 879 aaPredicted RBP26.45■■□□□ 1.82
HLA-C-209ENST00000495835 LIG4P49917 911 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 SOX4Q06945 474 aaPredicted RBP26.45■■□□□ 1.82
HLA-C-209ENST00000495835 MTMR3Q13615 1198 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 RAB33AQ14088 237 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 RRAGBQ5VZM2 374 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 FAM173BQ6P4H8 233 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 ANKS3Q6ZW76 656 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 USP49Q70CQ1 688 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 USP28Q96RU2 1077 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 PRKD2Q9BZL6 878 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 GOLGA2P5Q9HBQ8 144 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 MTRRQ9UBK8 725 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 FBXW11Q9UKB1 542 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 BACE2Q9Y5Z0 518 aa26.45■■□□□ 1.82
HLA-C-209ENST00000495835 K7ENM7 598 aa26.44■■□□□ 1.82
HLA-C-209ENST00000495835 PODXLO00592 558 aa26.44■■□□□ 1.82
HLA-C-209ENST00000495835 HNRNPDLO14979 420 aaKnown RBP26.44■■□□□ 1.82
HLA-C-209ENST00000495835 HNRNPA1P09651 372 aaKnown RBP eCLIP26.44■■□□□ 1.82
HLA-C-209ENST00000495835 HARSP12081 509 aaKnown RBP26.44■■□□□ 1.82
HLA-C-209ENST00000495835 MATR3P43243 847 aaKnown RBP eCLIP26.44■■□□□ 1.82
HLA-C-209ENST00000495835 NASPP49321 788 aaPredicted RBP26.44■■□□□ 1.82
HLA-C-209ENST00000495835 UVSSAQ2YD98 709 aa26.44■■□□□ 1.82
HLA-C-209ENST00000495835 GLYCTKQ8IVS8 523 aa26.44■■□□□ 1.82
HLA-C-209ENST00000495835 SMG7Q92540 1137 aaKnown RBP26.44■■□□□ 1.82
HLA-C-209ENST00000495835 ZNF707Q96C28 371 aaPredicted RBP26.44■■□□□ 1.82
HLA-C-209ENST00000495835 FIZ1Q96SL8 496 aa26.44■■□□□ 1.82
HLA-C-209ENST00000495835 SEL1LQ9UBV2 794 aa26.44■■□□□ 1.82
HLA-C-209ENST00000495835 SYN3O14994 580 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 RFPL2O75678 378 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 SPATA31D3P0C874 917 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 HOXA9P31269 272 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 CEBPZQ03701 1054 aaKnown RBP26.43■■□□□ 1.82
HLA-C-209ENST00000495835 SPECC1Q5M775 1068 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 CCDC73Q6ZRK6 1079 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 SPATA31D4Q6ZUB0 917 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 SV2BQ7L1I2 683 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 MAP4K3Q8IVH8 894 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 C3orf58Q8NDZ4 430 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 PBXIP1Q96AQ6 731 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 HAPLN2Q9GZV7 340 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 LIMD1Q9UGP4 676 aa26.43■■□□□ 1.82
HLA-C-209ENST00000495835 CLUHO75153 1309 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 TTC26A0AVF1 554 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 OGTO15294 1046 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 ADRB2P07550 413 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 POU2F2P09086 479 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 CYP3A5P20815 502 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 LIN9Q5TKA1 542 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 HSCBQ8IWL3 235 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 CD302Q8IX05 232 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 HVCN1Q96D96 273 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 ASIC4Q96FT7 647 aa26.42■■□□□ 1.82
HLA-C-209ENST00000495835 CLIC6Q96NY7 704 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms