RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 COA7Q96BR5 231 aa6.89□□□□□ -1.31
NCL-210ENST00000494618 ZNF768Q9H5H4 540 aaKnown RBP6.89□□□□□ -1.31
NCL-210ENST00000494618 AKIP1Q9NQ31 210 aa6.89□□□□□ -1.31
NCL-210ENST00000494618 RUVBL1Q9Y265 456 aaKnown RBP6.89□□□□□ -1.31
NCL-210ENST00000494618 CHST2Q9Y4C5 530 aa6.89□□□□□ -1.31
NCL-210ENST00000494618 PCDHA13Q9Y5I0 950 aa6.89□□□□□ -1.31
NCL-210ENST00000494618 WNT10BO00744 389 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 HTRA2O43464 458 aaPredicted RBP6.88□□□□□ -1.31
NCL-210ENST00000494618 SGTAO43765 313 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 NR4A1P22736 598 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 ADKP55263 362 aaKnown RBP6.88□□□□□ -1.31
NCL-210ENST00000494618 CTXN1P60606 82 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 KLF10Q13118 480 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 AGAP9Q5VTM2 703 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 KCNV1Q6PIU1 500 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 LRRC55Q6ZSA7 311 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 RHOT2Q8IXI1 618 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 PROKR1Q8TCW9 393 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 MYEOVQ96EZ4 313 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 SLC23A1Q9UHI7 598 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 IPPQ9Y573 584 aa6.88□□□□□ -1.31
NCL-210ENST00000494618 TMEM191CA6NGB0 347 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 CCDC154A6NI56 674 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 ZNF185O15231 689 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 NCR1O76036 304 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 HMGA2P52926 109 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 TGFB2P61812 414 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 ATP8B2P98198 1209 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 UAP1L1Q3KQV9 507 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 PDCD4Q53EL6 469 aaKnown RBP6.87□□□□□ -1.31
NCL-210ENST00000494618 TSHZ3Q63HK5 1081 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 RHOUQ7L0Q8 258 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 UBE3BQ7Z3V4 1068 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 ZBTB46Q86UZ6 589 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 ZGPATQ8N5A5 531 aaKnown RBP6.87□□□□□ -1.31
NCL-210ENST00000494618 NLGN4YQ8NFZ3 816 aaPredicted RBP6.87□□□□□ -1.31
NCL-210ENST00000494618 LARP4BQ92615 738 aaKnown RBP6.87□□□□□ -1.31
NCL-210ENST00000494618 TMX3Q96JJ7 454 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 CEP89Q96ST8 783 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 PRRX2Q99811 253 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 MYOCQ99972 504 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 MRIQ9BWK5 157 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 C11orf54Q9H0W9 315 aaPredicted RBP6.87□□□□□ -1.31
NCL-210ENST00000494618 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
NCL-210ENST00000494618 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.87□□□□□ -1.31
NCL-210ENST00000494618 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 FPGT-TNNI3KV9GXZ4 949 aa6.87□□□□□ -1.31
NCL-210ENST00000494618 NDUFA10O95299 355 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 SLPIP03973 132 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 BMPR1AP36894 532 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 FAM189BP81408 668 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 RAB39AQ14964 217 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 ODF1Q14990 250 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 SPDYE7PQ495Y7 208 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 DACT2Q5SW24 774 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 METRNLQ641Q3 311 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 ARMC6Q6NXE6 501 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 ULK2Q8IYT8 1036 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 RPUSD2Q8IZ73 545 aaKnown RBP6.86□□□□□ -1.31
NCL-210ENST00000494618 FITM2Q8N6M3 262 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 CHMP4CQ96CF2 233 aa6.86□□□□□ -1.31
NCL-210ENST00000494618 KIAA0391O15091 583 aaKnown RBP6.85□□□□□ -1.31
NCL-210ENST00000494618 IL10RAQ13651 578 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 BEAN1Q3B7T3 259 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 GADL1Q6ZQY3 521 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 TTC7BQ86TV6 843 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 OR56A1Q8NGH5 318 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 RNPEPQ9H4A4 650 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 GSTO2Q9H4Y5 243 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 MAN1C1Q9NR34 630 aa6.85□□□□□ -1.31
NCL-210ENST00000494618 ING1Q9UK53 422 aaPredicted RBP6.85□□□□□ -1.31
NCL-210ENST00000494618 CFAP20Q9Y6A4 193 aaKnown RBP6.85□□□□□ -1.31
NCL-210ENST00000494618 TCRBV7S2A1N4TA0A589 114 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 TMEM200CA6NKL6 621 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 MTHFD1P11586 935 aaKnown RBP6.84□□□□□ -1.31
NCL-210ENST00000494618 CKBP12277 381 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 GCSHP23434 173 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 EDNRBP24530 442 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 INHBCP55103 352 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 DPTQ07507 201 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 TARDBPQ13148 414 aaKnown RBP eCLIP6.84□□□□□ -1.315e-20■■□□□ 12
NCL-210ENST00000494618 C3orf36Q3SXR2 165 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 FOXR2Q6PJQ5 311 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 MAPKAPK5Q8IW41 473 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 CPEB3Q8NE35 698 aaKnown RBP6.84□□□□□ -1.31
NCL-210ENST00000494618 CLPTM1LQ96KA5 538 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 NEU1Q99519 415 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 TEX101Q9BY14 249 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 KLHL11Q9NVR0 708 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 FBXO34Q9NWN3 711 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 CALCOCO1Q9P1Z2 691 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 LUC7L2Q9Y383 392 aaKnown RBP6.84□□□□□ -1.31
NCL-210ENST00000494618 NOX1Q9Y5S8 564 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 HS3ST4Q9Y661 456 aa6.84□□□□□ -1.31
NCL-210ENST00000494618 WDR33Q9C0J8 1336 aaKnown RBP6.83□□□□□ -1.32
NCL-210ENST00000494618 DTNBO60941 627 aa6.83□□□□□ -1.32
NCL-210ENST00000494618 VCAM1P19320 739 aa6.83□□□□□ -1.32
NCL-210ENST00000494618 DDX6P26196 483 aaKnown RBP eCLIP6.83□□□□□ -1.32
NCL-210ENST00000494618 NEK2P51955 445 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms