RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
LIMS2-216ENST00000494613 RRAGBQ5VZM2 374 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
LIMS2-216ENST00000494613 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 SNX27Q96L92 541 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 SLC38A7Q9NVC3 462 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 ANKFY1Q9P2R3 1169 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 TRIOO75962 3097 aa17.06■□□□□ 0.32
LIMS2-216ENST00000494613 TRAPPC3O43617 180 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 FGFR3P22607 806 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 BRCC3P46736 316 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 CREMQ03060 361 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 NOLC1Q14978 699 aaKnown RBP eCLIP17.05■□□□□ 0.32
LIMS2-216ENST00000494613 ELMSAN1Q6PJG2 1045 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 CYP26C1Q6V0L0 522 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 HFE2Q6ZVN8 426 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 ZDHHC14Q8IZN3 488 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 KRI1Q8N9T8 703 aaKnown RBP17.05■□□□□ 0.32
LIMS2-216ENST00000494613 KREMEN2Q8NCW0 462 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 C3orf58Q8NDZ4 430 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 C18orf25Q96B23 403 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-216ENST00000494613 BICD1Q96G01 975 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 FIZ1Q96SL8 496 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 CNTN3Q9P232 1028 aa17.05■□□□□ 0.32
LIMS2-216ENST00000494613 MORC2Q9Y6X9 1032 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-216ENST00000494613 ADAM12O43184 909 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 CLTAP09496 248 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 SCP2P22307 547 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 NMT1P30419 496 aaKnown RBP17.04■□□□□ 0.32
LIMS2-216ENST00000494613 RPL9P32969 192 aaKnown RBP17.04■□□□□ 0.32
LIMS2-216ENST00000494613 GTF2BQ00403 316 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 PSMD5Q16401 504 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 PTPN21Q16825 1174 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 ZC2HC1CQ53FD0 456 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-216ENST00000494613 PDXDC1Q6P996 788 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-216ENST00000494613 SV2BQ7L1I2 683 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 BMP8AQ7Z5Y6 402 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 ZNF707Q96C28 371 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-216ENST00000494613 PLEKHA5Q9HAU0 1116 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
LIMS2-216ENST00000494613 MYO10Q9HD67 2058 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 TRIP11Q15643 1979 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 TMEM221A6NGB7 291 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 MYMKA6NI61 221 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 I3L4J1 428 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 M0R296 226 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 PODXLO00592 558 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 PAPLNO95428 1278 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 PIGRP01833 764 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 TKTP29401 623 aaKnown RBP17.03■□□□□ 0.32
LIMS2-216ENST00000494613 OR1D2P34982 312 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-216ENST00000494613 LIG4P49917 911 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 RSPO2Q6UXX9 243 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-216ENST00000494613 OTOP3Q7RTS5 596 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 ZNF720Q7Z2F6 126 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 LINC00301Q8NCQ3 95 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 SMG7Q92540 1137 aaKnown RBP17.03■□□□□ 0.32
LIMS2-216ENST00000494613 DDX12PQ92771 950 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 PBXIP1Q96AQ6 731 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 ACSF2Q96CM8 615 aaPredicted RBP17.03■□□□□ 0.32
LIMS2-216ENST00000494613 RHOBTB2Q9BYZ6 727 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 PRKD2Q9BZL6 878 aa17.03■□□□□ 0.32
LIMS2-216ENST00000494613 WDR6Q9NNW5 1121 aaKnown RBP17.03■□□□□ 0.32
LIMS2-216ENST00000494613 A0A0B4J269 797 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 TTC26A0AVF1 554 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 LACTBL1A8MY62 500 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 ANKRD63C9JTQ0 380 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 K7ENM7 598 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 TBCAO75347 108 aaKnown RBP17.02■□□□□ 0.32
LIMS2-216ENST00000494613 ZMYND10O75800 440 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 ASGR2P07307 311 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 TXLNAP40222 546 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 TNFSF9P41273 254 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 SPAG1Q07617 926 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 SIGLEC14Q08ET2 396 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 RAB33AQ14088 237 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 ZBTB6Q15916 424 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 FOXD4L5Q5VV16 416 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-216ENST00000494613 CCDC149Q6ZUS6 474 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 TDRD5Q8NAT2 981 aaKnown RBP17.02■□□□□ 0.32
LIMS2-216ENST00000494613 FOXD4L4Q8WXT5 416 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-216ENST00000494613 DNAJC19Q96DA6 116 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 MFSD14AQ96MC6 490 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 ZNF396Q96N95 335 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-216ENST00000494613 PIDD1Q9HB75 910 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 ZDHHC7Q9NXF8 308 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 HCN4Q9Y3Q4 1203 aa17.02■□□□□ 0.32
LIMS2-216ENST00000494613 ARIH1Q9Y4X5 557 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-216ENST00000494613 MYH11P35749 1972 aa17.01■□□□□ 0.31
LIMS2-216ENST00000494613 A0A087X0B3 334 aa17.01■□□□□ 0.31
LIMS2-216ENST00000494613 HNRNPDLO14979 420 aaKnown RBP17.01■□□□□ 0.31
LIMS2-216ENST00000494613 SPTLC2O15270 562 aa17.01■□□□□ 0.31
LIMS2-216ENST00000494613 OGTO15294 1046 aa17.01■□□□□ 0.31
LIMS2-216ENST00000494613 ADRB2P07550 413 aa17.01■□□□□ 0.31
LIMS2-216ENST00000494613 CXCL8P10145 99 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms