RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CASP5P51878 434 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 ZNF135P52742 658 aaPredicted RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 PLTPP55058 493 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 EIF3BP55884 814 aaKnown RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 YWHAGP61981 247 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATG3-207ENST00000494571 TUBA4AP68366 448 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 KRT76Q01546 638 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 PLCB3Q01970 1234 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 GBE1Q04446 702 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 DPYDQ12882 1025 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 DNAJC3Q13217 504 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 MTMR2Q13614 643 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 CUL1Q13616 776 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 NCOA4Q13772 614 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 ITGA9Q13797 1035 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 KRT32Q14532 448 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 SLC29A2Q14542 456 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 NONOQ15233 471 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATG3-207ENST00000494571 TAF7Q15545 349 aaPredicted RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 ZYXQ15942 572 aaKnown RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 WASHC4Q2M389 1173 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 GRAMD1BQ3KR37 738 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 TDRD12Q587J7 1177 aaKnown RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 LPCAT4Q643R3 524 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 AAGABQ6PD74 315 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 DCDC5Q6ZRR9 648 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 TMTC3Q6ZXV5 915 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 MCM10Q7L590 875 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 ARPINQ7Z6K5 226 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 HEATR4Q86WZ0 1026 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 TMEM151BQ8IW70 566 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 CLIP4Q8N3C7 705 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 METTL25Q8N6Q8 603 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 ACMSDQ8TDX5 336 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 SPOCK2Q92563 424 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 MTMR8Q96EF0 704 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 NOX5Q96PH1 765 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 FMO2Q99518 471 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 CADM1Q9BY67 442 aaKnown RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 ZMYND12Q9H0C1 365 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 FANCEQ9HB96 536 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 NEK6Q9HC98 313 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 PIH1D3Q9NQM4 214 aaKnown RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 MAN1C1Q9NR34 630 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 ECHDC1Q9NTX5 307 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 CABP1Q9NZU7 370 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 MTRF1LQ9UGC7 380 aaKnown RBP4.28□□□□□ -1.72
ATG3-207ENST00000494571 ZFP69BQ9UJL9 534 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 DCTN4Q9UJW0 460 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 HPSEQ9Y251 543 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 DNAJC16Q9Y2G8 782 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 SCINQ9Y6U3 715 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 ABCC12Q96J65 1359 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 ROBO1Q9Y6N7 1651 aa4.28□□□□□ -1.72
ATG3-207ENST00000494571 AOX1Q06278 1338 aa4.28□□□□□ -1.73
ATG3-207ENST00000494571 TRIM49BA6NDI0 452 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 RSPH10B2B2RC85 870 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 UBAP1LF5GYI3 381 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 MAPK13O15264 365 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 KLHL41O60662 606 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 KATNA1O75449 491 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ATP5HO75947 161 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ABCB1P08183 1280 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 CYP21A2P08686 494 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 RSPH10BP0C881 870 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 POLR2EP19388 210 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 SKIV2L2P42285 1042 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 BTDP43251 543 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CHN2P52757 468 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CACNB3P54284 484 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 AQP4P55087 323 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CTAG1AP78358 180 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 MAP3K10Q02779 954 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 COL19A1Q14993 1142 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 LONRF1Q17RB8 773 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 EXOC3L4Q17RC7 722 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SYCP2LQ5T4T6 812 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 C6orf118Q5T5N4 469 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 C10orf62Q5T681 223 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 CDKAL1Q5VV42 579 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 FYB2Q5VWT5 728 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ACAD11Q709F0 780 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SFR1Q86XK3 245 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 VPS37DQ86XT2 251 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 GATAD2AQ86YP4 633 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CROCCP3Q8IVE0 287 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 CPNE9Q8IYJ1 553 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 TRIML2Q8N7C3 387 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 POU5F2Q8N7G0 328 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 LSMEM1Q8N8F7 131 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 LSM14AQ8ND56 463 aaKnown RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 SGCDQ92629 289 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 INPP5DQ92835 1189 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 ASIC4Q96FT7 647 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 FAM89AQ96GI7 184 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 EGLN2Q96KS0 407 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 PRICKLE1Q96MT3 831 aaPredicted RBP4.27□□□□□ -1.73
ATG3-207ENST00000494571 NEUROD6Q96NK8 337 aa4.27□□□□□ -1.73
ATG3-207ENST00000494571 SPOCK3Q9BQ16 436 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms