RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 RAB33AQ14088 237 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 PDIA5Q14554 519 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 UPP1Q16831 310 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 ZNF568Q3ZCX4 644 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 DCLRE1AQ6PJP8 1040 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 PARM1Q6UWI2 310 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 MTSS1LQ765P7 747 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 C3orf58Q8NDZ4 430 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 FGF13Q92913 245 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 SNX27Q96L92 541 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 RPP25Q9BUL9 199 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 GOLGA2P5Q9HBQ8 144 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 TOPORSQ9NS56 1045 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 HCFC1R1Q9NWW0 138 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 MTRRQ9UBK8 725 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 TNFSF13BQ9Y275 285 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 SIT1Q9Y3P8 196 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 CDY1Q9Y6F8 540 aa11.28□□□□□ -0.6
NUDCD3-210ENST00000493613 KIF26AQ9ULI4 1882 aaPredicted RBP11.27□□□□□ -0.6
NUDCD3-210ENST00000493613 CACNA1IQ9P0X4 2223 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 SMIM28A0A1B0GU29 152 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 E9PMD0 336 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 I3L4J1 428 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 DCNP07585 359 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.611e-6■■■■■ 28.5
NUDCD3-210ENST00000493613 TKTP29401 623 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 GRM5P41594 1212 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 NPTX2P47972 431 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 OSTNP61366 133 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 GPC5P78333 572 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 DMP1Q13316 513 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 RSPO2Q6UXX9 243 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 ANKS3Q6ZW76 656 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 ADSSL1Q8N142 457 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 CEP120Q8N960 986 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 ITFG1Q8TB96 612 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 ACO2Q99798 780 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 MRPL4Q9BYD3 311 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 CDT1Q9H211 546 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 DNM3Q9UQ16 869 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 PCDHB6Q9Y5E3 794 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 GTF3C3Q9Y5Q9 886 aa11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 NUP210Q8TEM1 1887 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-210ENST00000493613 PP2D1A8MPX8 630 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 LAD1O00515 517 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 HIP1RO75146 1068 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 POU2F2P09086 479 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 BRCC3P46736 316 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 SOX4Q06945 474 aaPredicted RBP11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 PABPC1LQ4VXU2 614 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 CD300LGQ6UXG3 332 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 ALKAL1Q6UXT8 129 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 RTL10Q7L3V2 364 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 DAW1Q8N136 415 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 PJA1Q8NG27 643 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 SHDQ96IW2 340 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 KIF2CQ99661 725 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 KXD1Q9BQD3 176 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 TARS2Q9BW92 718 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 FOXQ1Q9C009 403 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 KMT5AQ9NQR1 393 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 SLC38A7Q9NVC3 462 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 DLGAP2Q9P1A6 1054 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 ARHGAP28Q9P2N2 729 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 DNMT3BQ9UBC3 853 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 BACE2Q9Y5Z0 518 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 DENND4CQ5VZ89 1909 aa11.26□□□□□ -0.61
NUDCD3-210ENST00000493613 GVINP1Q7Z2Y8 2422 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 MCF2P10911 925 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 CDC25AP30304 524 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 PRPHP41219 470 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 STARD6P59095 220 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 ROR1Q01973 937 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 MAPK7Q13164 816 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 SNW1Q13573 536 aaKnown RBP11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 ZRSR1Q15695 479 aaKnown RBP11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 XKR4Q5GH76 650 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 RINT1Q6NUQ1 792 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 TAS1R3Q7RTX0 852 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 ZNF461Q8TAF7 563 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 KCNG4Q8TDN1 519 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 ING5Q8WYH8 240 aa11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
NUDCD3-210ENST00000493613 ACAP3Q96P50 834 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms