RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 PLA2G5P39877 138 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 OSTNP61366 133 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 RAB33AQ14088 237 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 MCM6Q14566 821 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
LRTM1-202ENST00000493075 PSMD5Q16401 504 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 KYAT1Q16773 422 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 PRSS55Q6UWB4 352 aaPredicted RBP12.57□□□□□ -0.4
LRTM1-202ENST00000493075 RTL10Q7L3V2 364 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 CEP57Q86XR8 500 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 MYCT1Q8N699 235 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 RASSF8Q8NHQ8 419 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 LRRC15Q8TF66 581 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 HASPINQ8TF76 798 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 LARP4BQ92615 738 aaKnown RBP12.57□□□□□ -0.4
LRTM1-202ENST00000493075 STAMQ92783 540 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 PBXIP1Q96AQ6 731 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 ZNF707Q96C28 371 aaPredicted RBP12.57□□□□□ -0.4
LRTM1-202ENST00000493075 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 ASIC4Q96FT7 647 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 ZMAT2Q96NC0 199 aaKnown RBP12.57□□□□□ -0.4
LRTM1-202ENST00000493075 TSPAN18Q96SJ8 248 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 CCDC39Q9UFE4 941 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 LIMD1Q9UGP4 676 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
LRTM1-202ENST00000493075 MTMR6Q9Y217 621 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 BACE2Q9Y5Z0 518 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 C5orf42Q9H799 3197 aa12.57□□□□□ -0.4
LRTM1-202ENST00000493075 TRAK2O60296 914 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 RFPL2O75678 378 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 ZMYND10O75800 440 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 FAM13AO94988 1023 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 PIGRP01833 764 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 KRT18P05783 430 aaKnown RBP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 CLTAP09496 248 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 HNRNPA1P09651 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 SPATA31D3P0C874 917 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 PDIA4P13667 645 aaKnown RBP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 RPL17P18621 184 aaKnown RBP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 SP100P23497 879 aaPredicted RBP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 MARCKSP29966 332 aaPredicted RBP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 MTMR3Q13615 1198 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 SLC39A14Q15043 492 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 UVSSAQ2YD98 709 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 SLC10A6Q3KNW5 377 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 SPATA31D4Q6ZUB0 917 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 ANKS3Q6ZW76 656 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 FEZF2Q8TBJ5 459 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 SMG7Q92540 1137 aaKnown RBP12.56□□□□□ -0.4
LRTM1-202ENST00000493075 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 ST6GALNAC4Q9H4F1 302 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 MTRRQ9UBK8 725 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 STK17AQ9UEE5 414 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 FBXW11Q9UKB1 542 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 TBX20Q9UMR3 447 aa12.56□□□□□ -0.4
LRTM1-202ENST00000493075 PODXLO00592 558 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 SYN3O14994 580 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 MEFVO15553 781 aaPredicted RBP12.55□□□□□ -0.4
LRTM1-202ENST00000493075 STX6O43752 255 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 ADRB2P07550 413 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 POU2F2P09086 479 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 IGFBP6P24592 240 aaPredicted RBP12.55□□□□□ -0.4
LRTM1-202ENST00000493075 HOXA9P31269 272 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 GTF2BQ00403 316 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 SOX4Q06945 474 aaPredicted RBP12.55□□□□□ -0.4
LRTM1-202ENST00000493075 USP49Q70CQ1 688 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 GLYCTKQ8IVS8 523 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 FBXL6Q8N531 539 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 KRI1Q8N9T8 703 aaKnown RBP12.55□□□□□ -0.4
LRTM1-202ENST00000493075 FIZ1Q96SL8 496 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 HAPLN2Q9GZV7 340 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 PIDD1Q9HB75 910 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.4
LRTM1-202ENST00000493075 IGSF9Q9P2J2 1179 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 ANKFY1Q9P2R3 1169 aa12.55□□□□□ -0.4
LRTM1-202ENST00000493075 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 TBCAO75347 108 aaKnown RBP12.54□□□□□ -0.4
LRTM1-202ENST00000493075 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
LRTM1-202ENST00000493075 CYP3A5P20815 502 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 OR1D2P34982 312 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 TXLNAP40222 546 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 LIG4P49917 911 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 ZBTB6Q15916 424 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 LIN9Q5TKA1 542 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 RRAGBQ5VZM2 374 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 FAM173BQ6P4H8 233 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 C3orf58Q8NDZ4 430 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 NXPE3Q969Y0 559 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 BICD1Q96G01 975 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 PRRX2Q99811 253 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 EPS15L1Q9UBC2 864 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 CLUHO75153 1309 aa12.54□□□□□ -0.4
LRTM1-202ENST00000493075 A0A0B4J269 797 aa12.53□□□□□ -0.4
LRTM1-202ENST00000493075 H7C4K7 107 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms