RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 LNX1Q8TBB1 728 aaPredicted RBP19.71■□□□□ 0.75
PTPRU-207ENST00000492954 USP28Q96RU2 1077 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 CLSTN3Q9BQT9 956 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 HAPLN2Q9GZV7 340 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 ZHX3Q9H4I2 956 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 PLEKHA4Q9H4M7 779 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 USTQ9Y2C2 406 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 I3L4J1 428 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 ADAM12O43184 909 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 C1RP00736 705 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 ASGR2P07307 311 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 FGFR3P22607 806 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 DDIT3P35638 169 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 MATR3P43243 847 aaKnown RBP eCLIP19.7■□□□□ 0.74
PTPRU-207ENST00000492954 SLC10A6Q3KNW5 377 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.7■□□□□ 0.74
PTPRU-207ENST00000492954 ZDHHC14Q8IZN3 488 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 KREMEN2Q8NCW0 462 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 HDAC7Q8WUI4 952 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 KCNN1Q92952 543 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 SNX21Q969T3 373 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 C18orf25Q96B23 403 aaPredicted RBP19.7■□□□□ 0.74
PTPRU-207ENST00000492954 ZNF707Q96C28 371 aaPredicted RBP19.7■□□□□ 0.74
PTPRU-207ENST00000492954 SLC38A7Q9NVC3 462 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 LIMD1Q9UGP4 676 aa19.7■□□□□ 0.74
PTPRU-207ENST00000492954 PODXLO00592 558 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 TRAK2O60296 914 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 TBCAO75347 108 aaKnown RBP19.69■□□□□ 0.74
PTPRU-207ENST00000492954 CXCL8P10145 99 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 TKTP29401 623 aaKnown RBP19.69■□□□□ 0.74
PTPRU-207ENST00000492954 BRCC3P46736 316 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 LIG4P49917 911 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 SIGLEC14Q08ET2 396 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 SMG7Q92540 1137 aaKnown RBP19.69■□□□□ 0.74
PTPRU-207ENST00000492954 DDX27Q96GQ7 796 aaKnown RBP19.69■□□□□ 0.74
PTPRU-207ENST00000492954 FIZ1Q96SL8 496 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 RHOBTB2Q9BYZ6 727 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 ZSCAN16Q9H4T2 348 aaPredicted RBP19.69■□□□□ 0.74
PTPRU-207ENST00000492954 CCDC39Q9UFE4 941 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 TBX20Q9UMR3 447 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 MYH11P35749 1972 aa19.69■□□□□ 0.74
PTPRU-207ENST00000492954 HNRNPDLO14979 420 aaKnown RBP19.68■□□□□ 0.74
PTPRU-207ENST00000492954 NMT1P30419 496 aaKnown RBP19.68■□□□□ 0.74
PTPRU-207ENST00000492954 PDXDC1Q6P996 788 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 CYP26C1Q6V0L0 522 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 OTOP3Q7RTS5 596 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 DYMQ7RTS9 669 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 PLCD3Q8N3E9 789 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 SMOC2Q9H3U7 446 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 WDR6Q9NNW5 1121 aaKnown RBP19.68■□□□□ 0.74
PTPRU-207ENST00000492954 ZDHHC7Q9NXF8 308 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 STK17AQ9UEE5 414 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 FBXW11Q9UKB1 542 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 SORCS3Q9UPU3 1222 aa19.68■□□□□ 0.74
PTPRU-207ENST00000492954 MUC6Q6W4X9 2439 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 DENND4AQ7Z401 1863 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 TRIP11Q15643 1979 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 TRAPPC3O43617 180 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 PAPLNO95428 1278 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 PIGRP01833 764 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 TXLNAP40222 546 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 MTMR3Q13615 1198 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 SLC39A14Q15043 492 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 ZBTB41Q5SVQ8 909 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 RRAGBQ5VZM2 374 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 BMP8AQ7Z5Y6 402 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 TMEM130Q8N3G9 435 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 KRI1Q8N9T8 703 aaKnown RBP19.67■□□□□ 0.74
PTPRU-207ENST00000492954 PBXIP1Q96AQ6 731 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 ACSF2Q96CM8 615 aaPredicted RBP19.67■□□□□ 0.74
PTPRU-207ENST00000492954 ASIC4Q96FT7 647 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 MFSD14AQ96MC6 490 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 TUBGCP4Q9UGJ1 667 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 MORC2Q9Y6X9 1032 aaPredicted RBP19.67■□□□□ 0.74
PTPRU-207ENST00000492954 CLUHO75153 1309 aa19.67■□□□□ 0.74
PTPRU-207ENST00000492954 C2orf16Q68DN1 1984 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 N4BP1O75113 896 aaKnown RBP19.66■□□□□ 0.74
PTPRU-207ENST00000492954 ZMYND10O75800 440 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 CLTAP09496 248 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 SCP2P22307 547 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 RPL9P32969 192 aaKnown RBP19.66■□□□□ 0.74
PTPRU-207ENST00000492954 TNFSF9P41273 254 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 NASPP49321 788 aaPredicted RBP19.66■□□□□ 0.74
PTPRU-207ENST00000492954 SPAG1Q07617 926 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 SLC39A4Q6P5W5 647 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 RSPO2Q6UXX9 243 aaPredicted RBP19.66■□□□□ 0.74
PTPRU-207ENST00000492954 SFR1Q86XK3 245 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 HSCBQ8IWL3 235 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 PRKD2Q9BZL6 878 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 PLEKHA5Q9HAU0 1116 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 PIDD1Q9HB75 910 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 MTRRQ9UBK8 725 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 VWA8A3KMH1 1905 aa19.66■□□□□ 0.74
PTPRU-207ENST00000492954 WDFY4Q6ZS81 3184 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 TTC26A0AVF1 554 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 MYMKA6NI61 221 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 FAM189A1O60320 539 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 OR1D2P34982 312 aa19.65■□□□□ 0.74
PTPRU-207ENST00000492954 PLA2G5P39877 138 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms