RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 SIN3AQ96ST3 1273 aa4.85□□□□□ -1.63
UBR4-215ENST00000492606 SNTG2Q9NY99 539 aa4.85□□□□□ -1.63
UBR4-215ENST00000492606 RIPK3Q9Y572 518 aa4.85□□□□□ -1.63
UBR4-215ENST00000492606 LAMA4Q16363 1823 aa4.85□□□□□ -1.63
UBR4-215ENST00000492606 GON4LQ3T8J9 2241 aa4.85□□□□□ -1.63
UBR4-215ENST00000492606 KNTC1P50748 2209 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 EMSYQ7Z589 1322 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 A0A1W2PQH9 124 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 SLC22A31A6NKX4 558 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 UPK3BL1B0FP48 263 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 UPK3BL2E5RIL1 263 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 ANHXE9PGG2 379 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 NCAM2O15394 837 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 FGF18O76093 207 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
UBR4-215ENST00000492606 STAT3P40763 770 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 GATMP50440 423 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 NLRP12P59046 1061 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 TLE3Q04726 772 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 PPP2R5DQ14738 602 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 TCEAL1Q15170 157 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 IGFBP7Q16270 282 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 TMEM201Q5SNT2 666 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 ZNF385CQ66K41 422 aaPredicted RBP4.84□□□□□ -1.63
UBR4-215ENST00000492606 SDE2Q6IQ49 451 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 TMPRSS7Q7RTY8 843 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 ATG9AQ7Z3C6 839 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 WDR5BQ86VZ2 330 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 C12orf40Q86WS4 652 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 LILRB2Q8N423 598 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 CPLX3Q8WVH0 158 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 GAB3Q8WWW8 586 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 DDX11Q96FC9 970 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 FERD3LQ96RJ6 166 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 NELL2Q99435 816 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 CORO1BQ9BR76 489 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 PLA2G12BQ9BX93 195 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 MKNK2Q9HBH9 465 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 TMEM260Q9NX78 707 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 PPP1R9AQ9ULJ8 1098 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 NUMBLQ9Y6R0 609 aa4.84□□□□□ -1.63
UBR4-215ENST00000492606 ABCA7Q8IZY2 2146 aa4.84□□□□□ -1.64
UBR4-215ENST00000492606 LOXHD1Q8IVV2 1947 aa4.84□□□□□ -1.64
UBR4-215ENST00000492606 BCLAF3A2AJT9 711 aaKnown RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 RSPH10B2B2RC85 870 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 TMPRSS2O15393 492 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 DDX58O95786 925 aaKnown RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 BPNT1O95861 308 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 RSPH10BP0C881 870 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 CD68P34810 354 aaPredicted RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 BTDP43251 543 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 ARL4DP49703 201 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 SNRPNP63162 240 aaKnown RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 CNTN2Q02246 1040 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 CREB5Q02930 508 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 DDR2Q16832 855 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 ARHGAP40Q5TG30 622 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 IQSEC1Q6DN90 963 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 KIAA1211Q6ZU35 1233 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 TPRG1Q6ZUI0 275 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 EEPD1Q7L9B9 569 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 RASGRP2Q7LDG7 609 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 UBE3BQ7Z3V4 1068 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 SESTD1Q86VW0 696 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 CMTR2Q8IYT2 770 aaKnown RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 EXD3Q8N9H8 876 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 REPS2Q8NFH8 660 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 OR6P1Q8NGX9 317 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 UBASH3BQ8TF42 649 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 ZC3H10Q96K80 434 aaKnown RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 CAMK1GQ96NX5 476 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 TCF25Q9BQ70 676 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 METTL22Q9BUU2 404 aaPredicted RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 TMPRSS13Q9BYE2 586 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 CCDC113Q9H0I3 377 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 CSRNP2Q9H175 543 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 PHAXQ9H814 394 aaKnown RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 CPNE5Q9HCH3 593 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 REV1Q9UBZ9 1251 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 TSPYL4Q9UJ04 414 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 ZNF214Q9UL59 606 aaPredicted RBP4.83□□□□□ -1.64
UBR4-215ENST00000492606 ADAMTS5Q9UNA0 930 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 HIF3AQ9Y2N7 669 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 CUBNO60494 3623 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 TACC2O95359 2948 aa4.83□□□□□ -1.64
UBR4-215ENST00000492606 PI4KAP42356 2102 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 A0A0A0MRY4 1105 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 A0A1W2PRG0 241 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 A1L4Q6 167 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 FAM149AA5PLN7 773 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 ENPP3O14638 875 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 RRP8O43159 456 aaKnown RBP4.82□□□□□ -1.64
UBR4-215ENST00000492606 RPP40O75818 363 aaKnown RBP4.82□□□□□ -1.64
UBR4-215ENST00000492606 FLOT1O75955 427 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 RNF224P0DH78 156 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 IMPDH2P12268 514 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 PXNP49023 591 aaPredicted RBP4.82□□□□□ -1.64
UBR4-215ENST00000492606 GCKRQ14397 625 aa4.82□□□□□ -1.64
UBR4-215ENST00000492606 TRIP6Q15654 476 aaKnown RBP4.82□□□□□ -1.64
UBR4-215ENST00000492606 PLK5Q496M5 336 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms