RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 PALB2Q86YC2 1186 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
MDC1-207ENST00000492462 ACAP3Q96P50 834 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 IKZF4Q9H2S9 585 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
MDC1-207ENST00000492462 PARVGQ9HBI0 331 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 MAN1C1Q9NR34 630 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 PKD1L2Q7Z442 2459 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 SF3B1O75533 1304 aaKnown RBP eCLIP12.89□□□□□ -0.35
MDC1-207ENST00000492462 PTPRZ1P23471 2315 aaPredicted RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 MYMKA6NI61 221 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 TISP43B9A030 160 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 ADAM12O43184 909 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 TRAK2O60296 914 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 RFPL2O75678 378 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 ADH1AP07327 375 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 TNFSF9P41273 254 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 BRCC3P46736 316 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 SPAG1Q07617 926 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 MCL1Q07820 350 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 NOLC1Q14978 699 aaKnown RBP eCLIP12.89□□□□□ -0.35
MDC1-207ENST00000492462 UPP1Q16831 310 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 HERC4Q5GLZ8 1057 aaPredicted RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 ZBTB41Q5SVQ8 909 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 RRAGBQ5VZM2 374 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 SLC39A4Q6P5W5 647 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 CEP57Q86XR8 500 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 LNX1Q8TBB1 728 aaPredicted RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 SFXN1Q9H9B4 322 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
MDC1-207ENST00000492462 CCDC39Q9UFE4 941 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 KCNG1Q9UIX4 513 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 TBX20Q9UMR3 447 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 SSX2IPQ9Y2D8 614 aa12.89□□□□□ -0.35
MDC1-207ENST00000492462 C2CD4DB7Z1M9 353 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 CLDN3O15551 220 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 TGM5O43548 720 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 B3GAT3O94766 335 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 GLUD1P00367 558 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 CXCL8P10145 99 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 KCNE1P15382 129 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 MTHFRP42898 656 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
MDC1-207ENST00000492462 STK38Q15208 465 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 ATAT1Q5SQI0 421 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 LILRA6Q6PI73 481 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 DCLRE1AQ6PJP8 1040 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 ERMP1Q7Z2K6 904 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 GPR149Q86SP6 731 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 SFR1Q86XK3 245 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 PDILTQ8N807 584 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 KCNN1Q92952 543 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 DNAJC19Q96DA6 116 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 BICD1Q96G01 975 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 RIPOR3Q96MK2 946 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 NECTIN4Q96NY8 510 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 CLSTN3Q9BQT9 956 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 TTPALQ9BTX7 342 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 STK17AQ9UEE5 414 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 MORC2Q9Y6X9 1032 aaPredicted RBP12.88□□□□□ -0.35
MDC1-207ENST00000492462 ANK1P16157 1881 aa12.88□□□□□ -0.35
MDC1-207ENST00000492462 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 ANKRD63C9JTQ0 380 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 H0YCG3 227 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 PODXLO00592 558 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 HNRNPDLO14979 420 aaKnown RBP12.87□□□□□ -0.35
MDC1-207ENST00000492462 SPTLC2O15270 562 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 FAM189A1O60320 539 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 GFRA3O60609 400 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 PIGRP01833 764 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
MDC1-207ENST00000492462 ZSCAN22P10073 491 aaPredicted RBP12.87□□□□□ -0.35
MDC1-207ENST00000492462 FGFR3P22607 806 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 TKTP29401 623 aaKnown RBP12.87□□□□□ -0.35
MDC1-207ENST00000492462 LIG4P49917 911 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 GTF2BQ00403 316 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 PSMD5Q16401 504 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 RSPO2Q6UXX9 243 aaPredicted RBP12.87□□□□□ -0.35
MDC1-207ENST00000492462 GPR65Q8IYL9 337 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 PIK3R5Q8WYR1 880 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 DDX12PQ92771 950 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 STAMQ92783 540 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
MDC1-207ENST00000492462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.87□□□□□ -0.35
MDC1-207ENST00000492462 TBC1D7Q9P0N9 293 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 ZFHX4Q86UP3 3567 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 KMT2BQ9UMN6 2715 aaPredicted RBP12.87□□□□□ -0.35
MDC1-207ENST00000492462 DOCK8Q8NF50 2099 aa12.87□□□□□ -0.35
MDC1-207ENST00000492462 TTC26A0AVF1 554 aa12.86□□□□□ -0.35
MDC1-207ENST00000492462 F13A1P00488 732 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms