RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 USP28Q96RU2 1077 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 ZSCAN16Q9H4T2 348 aaPredicted RBP16.4■□□□□ 0.22
TOM1-215ENST00000491987 CNTN3Q9P232 1028 aa16.4■□□□□ 0.22
TOM1-215ENST00000491987 TRAK2O60296 914 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 KCNE1P15382 129 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 FGFR3P22607 806 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 DDIT3P35638 169 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 TXLNAP40222 546 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 BRCC3P46736 316 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 LIG4P49917 911 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 LILRA6Q6PI73 481 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 CD300LGQ6UXG3 332 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.39■□□□□ 0.21
TOM1-215ENST00000491987 KREMEN2Q8NCW0 462 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 HDAC7Q8WUI4 952 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 C18orf25Q96B23 403 aaPredicted RBP16.39■□□□□ 0.21
TOM1-215ENST00000491987 CLSTN3Q9BQT9 956 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 HAPLN2Q9GZV7 340 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 PLEKHA4Q9H4M7 779 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 SLC38A7Q9NVC3 462 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 TBX20Q9UMR3 447 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 USTQ9Y2C2 406 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
TOM1-215ENST00000491987 C2orf16Q68DN1 1984 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 TMEM221A6NGB7 291 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 M0R296 226 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 PODXLO00592 558 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 HNRNPDLO14979 420 aaKnown RBP16.38■□□□□ 0.21
TOM1-215ENST00000491987 ADAM12O43184 909 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 C1RP00736 705 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 ASGR2P07307 311 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 TKTP29401 623 aaKnown RBP16.38■□□□□ 0.21
TOM1-215ENST00000491987 SLC39A14Q15043 492 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 SLC10A6Q3KNW5 377 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 RRAGBQ5VZM2 374 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 PDXDC1Q6P996 788 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 ZDHHC14Q8IZN3 488 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 SMG7Q92540 1137 aaKnown RBP16.38■□□□□ 0.21
TOM1-215ENST00000491987 KCNN1Q92952 543 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 ZNF707Q96C28 371 aaPredicted RBP16.38■□□□□ 0.21
TOM1-215ENST00000491987 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
TOM1-215ENST00000491987 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 CXCL8P10145 99 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 NMT1P30419 496 aaKnown RBP16.37■□□□□ 0.21
TOM1-215ENST00000491987 SPAG1Q07617 926 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 DYMQ7RTS9 669 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 KRI1Q8N9T8 703 aaKnown RBP16.37■□□□□ 0.21
TOM1-215ENST00000491987 ACSF2Q96CM8 615 aaPredicted RBP16.37■□□□□ 0.21
TOM1-215ENST00000491987 DDX27Q96GQ7 796 aaKnown RBP16.37■□□□□ 0.21
TOM1-215ENST00000491987 FIZ1Q96SL8 496 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 PIDD1Q9HB75 910 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 ZDHHC7Q9NXF8 308 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 TUBGCP4Q9UGJ1 667 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 LIMD1Q9UGP4 676 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 FBXW11Q9UKB1 542 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 SORCS3Q9UPU3 1222 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 CLUHO75153 1309 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 VWA8A3KMH1 1905 aa16.37■□□□□ 0.21
TOM1-215ENST00000491987 ZMYND10O75800 440 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 PIGRP01833 764 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 CLTAP09496 248 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 SCP2P22307 547 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 TNFSF9P41273 254 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 STK38Q15208 465 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 ZC2HC1CQ53FD0 456 aaPredicted RBP16.36■□□□□ 0.21
TOM1-215ENST00000491987 LIN9Q5TKA1 542 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
TOM1-215ENST00000491987 CYP26C1Q6V0L0 522 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 OTOP3Q7RTS5 596 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 PLCD3Q8N3E9 789 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
TOM1-215ENST00000491987 RHOBTB2Q9BYZ6 727 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 SMOC2Q9H3U7 446 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 WDR6Q9NNW5 1121 aaKnown RBP16.36■□□□□ 0.21
TOM1-215ENST00000491987 MTRRQ9UBK8 725 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
TOM1-215ENST00000491987 TRIP11Q15643 1979 aa16.36■□□□□ 0.21
TOM1-215ENST00000491987 CITO14578 2027 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 HSP90AA1P07900 732 aaKnown RBP16.35■□□□□ 0.21
TOM1-215ENST00000491987 RPL9P32969 192 aaKnown RBP16.35■□□□□ 0.21
TOM1-215ENST00000491987 OR1D2P34982 312 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 STAT6P42226 847 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 NASPP49321 788 aaPredicted RBP16.35■□□□□ 0.21
TOM1-215ENST00000491987 GTF2BQ00403 316 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 MTMR3Q13615 1198 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 ZBTB41Q5SVQ8 909 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 SLC39A4Q6P5W5 647 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 RSPO2Q6UXX9 243 aaPredicted RBP16.35■□□□□ 0.21
TOM1-215ENST00000491987 SV2BQ7L1I2 683 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 BMP8AQ7Z5Y6 402 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 SFR1Q86XK3 245 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 MAP4K3Q8IVH8 894 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 TMEM130Q8N3G9 435 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 DDX12PQ92771 950 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 PBXIP1Q96AQ6 731 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 ASIC4Q96FT7 647 aa16.35■□□□□ 0.21
TOM1-215ENST00000491987 MFSD14AQ96MC6 490 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms