RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 IRF2BPLQ9H1B7 796 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 CNTN3Q9P232 1028 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 MTRRQ9UBK8 725 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 WNT16Q9UBV4 365 aa9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 ZFP37Q9Y6Q3 630 aaPredicted RBP9.2□□□□□ -0.94
SMARCB1-207ENST00000491967 CCDC169A6NNP5 214 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 TOM1L1O75674 476 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 B3GAT3O94766 335 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 ABLIM3O94929 683 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 ADRB2P07550 413 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 MAPTP10636 758 aaKnown RBP9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 PLS3P13797 630 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 SCP2P22307 547 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 GJB2P29033 226 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 CLCNKBP51801 687 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 ZNF131P52739 623 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 HTR4Q13639 388 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 ZBTB6Q15916 424 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 PSMD5Q16401 504 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC8B1Q6J4K2 584 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 MPZL3Q6UWV2 235 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 RSPO2Q6UXX9 243 aaPredicted RBP9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 ZPBP2Q6X784 338 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC44A3Q8N4M1 653 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 CEP120Q8N960 986 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 LRRC15Q8TF66 581 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 PHOX2BQ99453 314 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 KMT5AQ9NQR1 393 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 TOPORSQ9NS56 1045 aaPredicted RBP9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC38A7Q9NVC3 462 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 GDAQ9Y2T3 454 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 CACNA1IQ9P0X4 2223 aa9.19□□□□□ -0.94
SMARCB1-207ENST00000491967 ARHGEF37A1IGU5 675 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 SFI1A8K8P3 1242 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC16A4O15374 487 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 TRAPPC3O43617 180 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 FAM189A1O60320 539 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 PLA2G4BP0C869 781 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 RPL9P32969 192 aaKnown RBP9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 NCKAP1LP55160 1127 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 MCL1Q07820 350 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 CUL4AQ13619 759 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC10A6Q3KNW5 377 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 CWF19L1Q69YN2 538 aaKnown RBP9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 ANKS3Q6ZW76 656 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 ZNF461Q8TAF7 563 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 HASPINQ8TF76 798 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 ACAP3Q96P50 834 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 FIZ1Q96SL8 496 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 CCDC94Q9BW85 323 aaPredicted RBP9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 HAPLN2Q9GZV7 340 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 PLEKHA5Q9HAU0 1116 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 SLC2A4RGQ9NR83 387 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 BLOC1S4Q9NUP1 217 aa9.18□□□□□ -0.94
SMARCB1-207ENST00000491967 F5P12259 2224 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 MYH15Q9Y2K3 1946 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 TTC26A0AVF1 554 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 KRBA1A5PL33 1030 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 VWA3AA6NCI4 1184 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 SYN3O14994 580 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 BMP15O95972 392 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 PIGRP01833 764 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 C8AP07357 584 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 SRFP11831 508 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 LIG1P18858 919 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 AOC1P19801 751 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 TKTP29401 623 aaKnown RBP9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 OR1D2P34982 312 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 NBL1P41271 181 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 SMTNP53814 917 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 YARSP54577 528 aaKnown RBP9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 ZNF568Q3ZCX4 644 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 GLRA4Q5JXX5 417 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 AXDND1Q5T1B0 1012 aaPredicted RBP9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 LARP1BQ659C4 914 aaKnown RBP9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 MCTP1Q6DN14 999 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 BRAPQ7Z569 592 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 CEP57Q86XR8 500 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 RSAD2Q8WXG1 361 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 ZBTB45Q96K62 511 aaPredicted RBP9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 SUSD3Q96L08 255 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 CCSER1Q9C0I3 900 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 CDH7Q9ULB5 785 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 KCNH3Q9ULD8 1083 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 ODF2LQ9ULJ1 636 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 MAFFQ9ULX9 164 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 MORC2Q9Y6X9 1032 aaPredicted RBP9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 GVINP1Q7Z2Y8 2422 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 FANCMQ8IYD8 2048 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 ANK1P16157 1881 aa9.17□□□□□ -0.94
SMARCB1-207ENST00000491967 USP34Q70CQ2 3546 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 SPTBN4Q9H254 2564 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 H0YCG3 227 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 H3BQV1 296 aa9.16□□□□□ -0.94
SMARCB1-207ENST00000491967 M0QZQ0 153 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms