RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ACKR2O00590 384 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 SLC16A4O15374 487 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 B4GALT5O43286 388 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 PDGFBP01127 241 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 PRKCBP05771 671 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 IDEP14735 1019 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 AFMP43652 599 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 SCNN1GP51170 649 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 TCF15Q12870 199 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 CUL4BQ13620 913 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 ATAT1Q5SQI0 421 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 TMC5Q6UXY8 1006 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 GPR149Q86SP6 731 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 SFR1Q86XK3 245 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 ZDHHC14Q8IZN3 488 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 HVCN1Q96D96 273 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 FAM193BQ96PV7 902 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 ZHX3Q9H4I2 956 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 SFXN1Q9H9B4 322 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 USTQ9Y2C2 406 aa16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE1-205ENST00000491825 K7ENM7 598 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 PPP1R37O75864 691 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 ASGR2P07307 311 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 GTF2BQ00403 316 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 NCBP1Q09161 790 aaKnown RBP16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 ALCAMQ13740 583 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 POSTNQ15063 836 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 TAS1R3Q7RTX0 852 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 TAS1R1Q7RTX1 841 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 HAUS6Q7Z4H7 955 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 TDRD5Q8NAT2 981 aaKnown RBP16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 RPS6KC1Q96S38 1066 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 STRA6Q9BX79 667 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 EMILIN2Q9BXX0 1053 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 BLZF1Q9H2G9 400 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 SMOC2Q9H3U7 446 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 MRPL17Q9NRX2 175 aaKnown RBP16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 LMBRD1Q9NUN5 540 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 GIT1Q9Y2X7 761 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 KMT2EQ8IZD2 1858 aa16.43■□□□□ 0.22
CDC42SE1-205ENST00000491825 DMDP11532 3685 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 ZMYM2Q9UBW7 1377 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 A0A1B0GUA9 196 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 URODP06132 367 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 KLRC2P26717 231 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 AVPR2P30518 371 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 OR1G1P47890 313 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 PTPN5P54829 565 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 DPYDQ12882 1025 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 PRPF4BQ13523 1007 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 KIAA0319Q5VV43 1072 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 ZNF720Q7Z2F6 126 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 ZBTB33Q86T24 672 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 MAP4K3Q8IVH8 894 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 UBALD2Q8IYN6 164 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 PHOX2BQ99453 314 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 PRRX2Q99811 253 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 MRPL4Q9BYD3 311 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 MRPL44Q9H9J2 332 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 RXFP1Q9HBX9 757 aa16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
CDC42SE1-205ENST00000491825 TEX28O15482 410 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 KLRC4O43908 158 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 PAPLNO95428 1278 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 PIGRP01833 764 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 EDN1P05305 212 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 CASP1P29466 404 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 NMT1P30419 496 aaKnown RBP16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 DSG1Q02413 1049 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 STRN3Q13033 797 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 SLC27A1Q6PCB7 646 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 C15orf39Q6ZRI6 1047 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 CMASQ8NFW8 434 aaPredicted RBP16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 SPATA20Q8TB22 786 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 APOL6Q9BWW8 343 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 CHST7Q9NS84 486 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 TBX20Q9UMR3 447 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 DENND4AQ7Z401 1863 aa16.41■□□□□ 0.22
CDC42SE1-205ENST00000491825 TTLL13PA6NNM8 815 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 C2CD2LO14523 706 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 N4BP3O15049 544 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 EIF3DO15371 548 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 NPTXRO95502 500 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 PROZP22891 400 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 AKAP5P24588 427 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 GLUD2P49448 558 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 FAM26FQ5R3K3 315 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 CCDC149Q6ZUS6 474 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 RHOBTB2Q9BYZ6 727 aa16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 TRIM6Q9C030 488 aaPredicted RBP16.4■□□□□ 0.22
CDC42SE1-205ENST00000491825 PDZD7Q9H5P4 517 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms