RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 EFEMP2O95967 443 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 SPATA31D3P0C874 917 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 MAPTP10636 758 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 KCNE1P15382 129 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 SYT1P21579 422 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 RFX1P22670 979 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 DDIT3P35638 169 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 CLCNKBP51801 687 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 MAPK7Q13164 816 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 KANK3Q6NY19 840 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 PRSS55Q6UWB4 352 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 SPATA31D4Q6ZUB0 917 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 APPL2Q8NEU8 664 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 CCSER1Q9C0I3 900 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 PTPRHQ9HD43 1115 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 STK17AQ9UEE5 414 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 XIRP2A4UGR9 3374 aa18.09■□□□□ 0.49
PDLIM2-217ENST00000491330 CLUHO75153 1309 aa18.08■□□□□ 0.49
PDLIM2-217ENST00000491330 F8W810 466 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 RPL17P18621 184 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 PLCG1P19174 1290 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 NUBP1P53384 320 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 NCKAP1LP55160 1127 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 PPP2R3AQ06190 1150 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 TDGQ13569 410 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 UPP1Q16831 310 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 RTP2Q5QGT7 225 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 RRAGBQ5VZM2 374 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 CCDC73Q6ZRK6 1079 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 LNX1Q8TBB1 728 aaPredicted RBP18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 RAD54LQ92698 747 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 SNX27Q96L92 541 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 REEP2Q9BRK0 252 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 PAAF1Q9BRP4 392 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 FBXL21Q9UKT6 434 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 POLIQ9UNA4 740 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 BACE2Q9Y5Z0 518 aa18.08■□□□□ 0.48
PDLIM2-217ENST00000491330 ARHGEF37A1IGU5 675 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 PODXLO00592 558 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 SYN3O14994 580 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 MYBP10242 640 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 FGFR3P22607 806 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 PROZP22891 400 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 PAX3P23760 479 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 HOXA9P31269 272 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 MCM4P33991 863 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 OR1D2P34982 312 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 MCL1Q07820 350 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 KARSQ15046 597 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 XKR4Q5GH76 650 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 SLFN12LQ6IEE8 588 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 LILRA6Q6PI73 481 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 SV2BQ7L1I2 683 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 CD302Q8IX05 232 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 ZNF396Q96N95 335 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 OXCT2Q9BYC2 517 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 RPF1Q9H9Y2 349 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 CNTN3Q9P232 1028 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 TBX20Q9UMR3 447 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 EXOC7Q9UPT5 735 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 SRPRBQ9Y5M8 271 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 ATG2AQ2TAZ0 1938 aa18.07■□□□□ 0.48
PDLIM2-217ENST00000491330 STX6O43752 255 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 RFPL2O75678 378 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 EDN1P05305 212 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 C8AP07357 584 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 PTPN5P54829 565 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 CACNB1Q02641 598 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 RAB33AQ14088 237 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 MCM6Q14566 821 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 NAB2Q15742 525 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 ALKAL1Q6UXT8 129 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 CEP120Q8N960 986 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 CLSTN3Q9BQT9 956 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 MTRRQ9UBK8 725 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 CDH22Q9UJ99 828 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 FBXW11Q9UKB1 542 aa18.06■□□□□ 0.48
PDLIM2-217ENST00000491330 NPHP3-ACAD11A0A0J9YXS1 232 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 PRRG1O14668 218 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 FSHRP23945 695 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 POSTNQ15063 836 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 ARSHQ5FYA8 562 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 TAS1R3Q7RTX0 852 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 USP37Q86T82 979 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 ELMOD1Q8N336 334 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 KIF12Q96FN5 646 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 MSTO1Q9BUK6 570 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 CACNG4Q9UBN1 327 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 SEL1LQ9UBV2 794 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 UBQLN1Q9UMX0 589 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 CDY1Q9Y6F8 540 aa18.05■□□□□ 0.48
PDLIM2-217ENST00000491330 MYH11P35749 1972 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 STK25O00506 426 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 OGTO15294 1046 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 LRG1P02750 347 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 ASGR2P07307 311 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 GAP43P17677 238 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 CYP3A5P20815 502 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms