RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SARM1Q6SZW1 724 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 OTOP2Q7RTS6 562 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 EFCAB13Q8IY85 973 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 CACTINQ8WUQ7 758 aaKnown RBP20.17■□□□□ 0.82
MCF2L-230ENST00000491028 HERVK_113Q902F9 699 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 KIF12Q96FN5 646 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 ANKRD36BP1Q96IX9 119 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 GAD1Q99259 594 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 NDST4Q9H3R1 872 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 INTS13Q9NVM9 706 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 KLK14Q9P0G3 267 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 PTPRSQ13332 1948 aa20.17■□□□□ 0.82
MCF2L-230ENST00000491028 SMIM28A0A1B0GU29 152 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 ARL5CA6NH57 179 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 PTGESO14684 152 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 PMM2O15305 246 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 P4HA2O15460 535 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 OFD1O75665 1012 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 NFICP08651 508 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 MAGEA10P43363 369 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-230ENST00000491028 DUOXA2Q1HG44 320 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 ABI1Q8IZP0 508 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 URGCPQ8TCY9 931 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 TOP1MTQ969P6 601 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 ZFP42Q96MM3 310 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 VPS16Q9H269 839 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 TMEM8AQ9HCN3 771 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 RNF19AQ9NV58 838 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 SLC38A7Q9NVC3 462 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 UBQLN1Q9UMX0 589 aaKnown RBP20.16■□□□□ 0.82
MCF2L-230ENST00000491028 PTPRJQ12913 1337 aa20.16■□□□□ 0.82
MCF2L-230ENST00000491028 TNRC18O15417 2968 aaPredicted RBP20.16■□□□□ 0.82
MCF2L-230ENST00000491028 A0A1B0GTH6 734 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 ZBBXA8MT70 800 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 LGALS16A8MUM7 142 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 CBFA2T2O43439 604 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 TNNC2P02585 160 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 FGFR1P11362 822 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 FMO5P49326 533 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 MXI1P50539 228 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 TFAMQ00059 246 aaKnown RBP20.15■□□□□ 0.82
MCF2L-230ENST00000491028 PPP3CAQ08209 521 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 GRIK3Q13003 919 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 ZBTB6Q15916 424 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 CLLU1OSQ5K130 101 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 KRT39Q6A163 491 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 GSTCDQ8NEC7 633 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 BEST2Q8NFU1 509 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 HELQQ8TDG4 1101 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 ZMAT2Q96NC0 199 aaKnown RBP20.15■□□□□ 0.82
MCF2L-230ENST00000491028 PPP1R10Q96QC0 940 aaKnown RBP20.15■□□□□ 0.82
MCF2L-230ENST00000491028 SLC9A7Q96T83 725 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 POP1Q99575 1024 aaKnown RBP20.15■□□□□ 0.82
MCF2L-230ENST00000491028 TMEM117Q9H0C3 514 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 GRPEL1Q9HAV7 217 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 KANSL3Q9P2N6 904 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 FNDC1Q4ZHG4 1894 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-230ENST00000491028 PDE4DIPQ5VU43 2346 aa20.15■□□□□ 0.82
MCF2L-230ENST00000491028 TULP1O00294 542 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-230ENST00000491028 PES1O00541 588 aaKnown RBP20.14■□□□□ 0.81
MCF2L-230ENST00000491028 TPM3P06753 285 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 THP07101 528 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 CYP3A5P20815 502 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 GCLMP48507 274 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 SCNN1GP51170 649 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 UBASH3AP57075 661 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 DEFB103AP81534 67 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 ZACNQ401N2 412 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 NOMO2Q5JPE7 1267 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 GLRA4Q5JXX5 417 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 FKBP15Q5T1M5 1219 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 LMBRD2Q68DH5 695 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-230ENST00000491028 C15orf39Q6ZRI6 1047 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 OR5B17Q8NGF7 314 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 ZNF516Q92618 1163 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 MRPL9Q9BYD2 267 aaKnown RBP20.14■□□□□ 0.81
MCF2L-230ENST00000491028 MTMR12Q9C0I1 747 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 CXCL16Q9H2A7 254 aa20.14■□□□□ 0.81
MCF2L-230ENST00000491028 RTN4Q9NQC3 1192 aaKnown RBP20.14■□□□□ 0.81
MCF2L-230ENST00000491028 GTPBP10A4D1E9 387 aaKnown RBP20.13■□□□□ 0.81
MCF2L-230ENST00000491028 C4BPAP04003 597 aaKnown RBP20.13■□□□□ 0.81
MCF2L-230ENST00000491028 PLCB2Q00722 1185 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 MYL7Q01449 175 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 CETN1Q12798 172 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 CBWD6Q4V339 395 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 CBWD3Q5JTY5 395 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 CBWD5Q5RIA9 395 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 SV2AQ7L0J3 742 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 PHOSPHO2Q8TCD6 241 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 CASD1Q96PB1 797 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 MMRN2Q9H8L6 949 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 IFNKQ9P0W0 207 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 ITGA11Q9UKX5 1188 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 INPP5FQ9Y2H2 1132 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 COL4A6Q14031 1691 aa20.13■□□□□ 0.81
MCF2L-230ENST00000491028 DGKIO75912 1065 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 UPP2O95045 317 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 MRE11P49959 708 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 BIRC3Q13489 604 aa20.12■□□□□ 0.81
MCF2L-230ENST00000491028 RASIP1Q5U651 963 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms