RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 Q7L0L9 218 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 ANKRD23Q86SG2 305 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 RIOX2Q8IUF8 465 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 KREMEN2Q8NCW0 462 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PLEKHO2Q8TD55 490 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 OTUD7AQ8TE49 926 aaPredicted RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 DCAF4Q8WV16 495 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SREK1Q8WXA9 508 aaKnown RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 OSBP2Q969R2 916 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 YIPF4Q9BSR8 244 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SPATA9Q9BWV2 254 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PANK2Q9BZ23 570 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PUS7LQ9H0K6 701 aaKnown RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 KANSL2Q9H9L4 492 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PCDH18Q9HCL0 1135 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 GPR27Q9NS67 375 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 TOMM22Q9NS69 142 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 ZBTB21Q9ULJ3 1066 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SLC45A1Q9Y2W3 748 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 MSRB2Q9Y3D2 182 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 CTDP1Q9Y5B0 961 aaPredicted RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 RBBP6Q7Z6E9 1792 aaKnown RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SETXQ7Z333 2677 aaKnown RBP5.43□□□□□ -1.54
CSTF1-205ENST00000490539 A0A0G2JLL6 359 aaPredicted RBP5.43□□□□□ -1.54
CSTF1-205ENST00000490539 A0A1W2PPC1 479 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 BTBD19C9JJ37 291 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 GOLGA6L22H0YM25 854 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 ZNF213O14771 459 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 PRKAB2O43741 272 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 CDC45O75419 566 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 DGKIO75912 1065 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 TSPY3P0CV98 308 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 TSPY8P0CW00 308 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 SDSP20132 328 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 GRIA2P42262 883 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 SLC6A11P48066 632 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 GCLCP48506 637 aaPredicted RBP5.43□□□□□ -1.54
CSTF1-205ENST00000490539 PLCD1P51178 756 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 AFF3P51826 1226 aaKnown RBP5.43□□□□□ -1.54
CSTF1-205ENST00000490539 HMGCS2P54868 508 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 BACE1P56817 501 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 TRDNQ13061 729 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 CRHR2Q13324 411 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 IMMTQ16891 758 aaKnown RBP5.43□□□□□ -1.54
CSTF1-205ENST00000490539 CCDC178Q5BJE1 867 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 TTC22Q5TAA0 569 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 C12orf60Q5U649 245 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 MBLAC2Q68D91 279 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 TATDN1Q6P1N9 297 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 CTR9Q6PD62 1173 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 C16orf86Q6ZW13 317 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 PRRT2Q7Z6L0 340 aaPredicted RBP5.43□□□□□ -1.54
CSTF1-205ENST00000490539 IGDCC3Q8IVU1 814 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 CCDC103Q8IW40 242 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 SCUBE1Q8IWY4 988 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 IFNL3Q8IZI9 196 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 RCBTB1Q8NDN9 531 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 BRI3BPQ8WY22 251 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 LPAR1Q92633 364 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 DPF3Q92784 378 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 PWWP2AQ96N64 755 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 ZFYVE21Q9BQ24 234 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 RXFP1Q9HBX9 757 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 NGRNQ9NPE2 291 aaKnown RBP5.43□□□□□ -1.54
CSTF1-205ENST00000490539 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 AGTPBP1Q9UPW5 1226 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 AFG3L2Q9Y4W6 797 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 X6R8D5 127 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 DOCK2Q92608 1830 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 CCDC171Q6TFL3 1326 aa5.43□□□□□ -1.54
CSTF1-205ENST00000490539 NCOR1O75376 2440 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 TSPY2A6NKD2 308 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 GSG1L2A8MUP6 293 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 M0R2C6 588 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 KRIT1O00522 736 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 DLX3O60479 287 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 RANBP6O60518 1105 aaKnown RBP5.42□□□□□ -1.54
CSTF1-205ENST00000490539 TLR2O60603 784 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 KRT37O76014 449 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 HOXA5P20719 270 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 CDK11BP21127 795 aaKnown RBP5.42□□□□□ -1.54
CSTF1-205ENST00000490539 PRMT2P55345 433 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 CCNA1P78396 465 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 ICA1Q05084 483 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 PPARAQ07869 468 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 SSPNQ14714 243 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 RABEP1Q15276 862 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 ZC3H12BQ5HYM0 836 aaKnown RBP5.42□□□□□ -1.54
CSTF1-205ENST00000490539 MFSD6Q6ZSS7 791 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 MILR1Q7Z6M3 343 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 ZC3H18Q86VM9 953 aaKnown RBP5.42□□□□□ -1.54
CSTF1-205ENST00000490539 IQCA1Q86XH1 822 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 RELTQ969Z4 430 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 COA7Q96BR5 231 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 SRPK1Q96SB4 655 aaKnown RBP5.42□□□□□ -1.54
CSTF1-205ENST00000490539 KIAA1683Q9H0B3 1180 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 EPB41L1Q9H4G0 881 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 ARHGEF4Q9NR80 690 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 HOXC10Q9NYD6 342 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms