RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	TRPS1	Q9UHF7	1281 aa		3.2	□□□□□ -1.9
PUM3-204	ENST00000490444	SERPINB13	Q9UIV8	391 aa		3.2	□□□□□ -1.9
PUM3-204	ENST00000490444	SIK3	Q9Y2K2	1263 aa		3.2	□□□□□ -1.9
PUM3-204	ENST00000490444	DAPK3	O43293	454 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	AKAP10	O43572	662 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	PRC1	O43663	620 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	SLC6A9	P48067	706 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	TBX4	P57082	545 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	RHBDL3	P58872	404 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	MGAT2	Q10469	447 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	PTPA	Q15257	358 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	C4orf46	Q504U0	113 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	MUM1L1	Q5H9M0	696 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	RABL3	Q5HYI8	236 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	MFSD5	Q6N075	450 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	KRBA2	Q6ZNG9	492 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	FMNL3	Q8IVF7	1028 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	AMOTL1	Q8IY63	956 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	CMTM4	Q8IZR5	234 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	CPA6	Q8N4T0	437 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	ZNF276	Q8N554	614 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	GPR156	Q8NFN8	814 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	PNISR	Q8TF01	805 aa	Known RBP	3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	ATXN2L	Q8WWM7	1075 aa	Known RBP	3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	PGBD4	Q96DM1	585 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	HOOK2	Q96ED9	719 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	PAWR	Q96IZ0	340 aa	Known RBP	3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	RPS6KC1	Q96S38	1066 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	MNT	Q99583	582 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	RHOBTB2	Q9BYZ6	727 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	IL23A	Q9NPF7	189 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	RBM12	Q9NTZ6	932 aa	Known RBP	3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	IPP	Q9Y573	584 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	RPTOR	Q8N122	1335 aa		3.19	□□□□□ -1.9
PUM3-204	ENST00000490444	ATRNL1	Q5VV63	1379 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	ADCY6	O43306	1168 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	STC2	O76061	302 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	IPO13	O94829	963 aa	Known RBP	3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	CASR	P41180	1078 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	RECQL	P46063	649 aa	Predicted RBP	3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	RAB27A	P51159	221 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	ADK	P55263	362 aa	Known RBP	3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	PIN1	Q13526	163 aa	Predicted RBP	3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	LY6G5C	Q5SRR4	150 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	OLFML1	Q6UWY5	402 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	FAM43B	Q6ZT52	329 aa	Predicted RBP	3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	ZBTB46	Q86UZ6	589 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	ELOA2	Q8IYF1	753 aa	Predicted RBP	3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	MB21D1	Q8N884	522 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	PROKR1	Q8TCW9	393 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	NRG4	Q8WWG1	115 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	JDP2	Q8WYK2	163 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	LENG9	Q96B70	501 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	COA7	Q96BR5	231 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	CAMKK2	Q96RR4	588 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	MAF1	Q9H063	256 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	CDH19	Q9H159	772 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	KCNH6	Q9H252	994 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	TOR3A	Q9H497	397 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	GNL3L	Q9NVN8	582 aa	Known RBP	3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	NCDN	Q9UBB6	729 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	LIMCH1	Q9UPQ0	1083 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	COMMD10	Q9Y6G5	202 aa		3.18	□□□□□ -1.9
PUM3-204	ENST00000490444	KLRG2	A4D1S0	409 aa	Predicted RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	CCER2	I3L3R5	266 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	HTRA2	O43464	458 aa	Predicted RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	XPOT	O43592	962 aa	Known RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	PRAMEF4	O60810	478 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	ITGA10	O75578	1167 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	ABHD16A	O95870	558 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	ITGB1	P05556	798 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	PTMA	P06454	111 aa	Known RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	GSPT1	P15170	499 aa	Known RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	GUCY1A2	P33402	732 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	CRHR1	P34998	444 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	SREBF1	P36956	1147 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	RABGGTB	P53611	331 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	EPHB1	P54762	984 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	NPEPPS	P55786	919 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	MRPL49	Q13405	166 aa	Known RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	CLUL1	Q15846	466 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	NFE2	Q16621	373 aa	Predicted RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	C3orf36	Q3SXR2	165 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	ODR4	Q5SWX8	454 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	EFCAB2	Q5VUJ9	269 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	C1QL3	Q5VWW1	255 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	CLEC4G	Q6UXB4	293 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	RHOU	Q7L0Q8	258 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	RD3	Q7Z3Z2	195 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	C11orf96	Q7Z7L8	435 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	VRK3	Q8IV63	474 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	TRMT2A	Q8IZ69	625 aa	Known RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	PRR18	Q8N4B5	295 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	PPM1N	Q8N819	430 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444		Q8N9P0	234 aa	Predicted RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	OR7D4	Q8NG98	312 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	ZNF480	Q8WV37	535 aa		3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	SMG7	Q92540	1137 aa	Known RBP	3.17	□□□□□ -1.9
PUM3-204	ENST00000490444	DPF2	Q92785	391 aa		3.17	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms