RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 SYT17Q9BSW7 474 aa5.3□□□□□ -1.56
RBM39-235ENST00000490354 CRNKL1Q9BZJ0 848 aaKnown RBP5.3□□□□□ -1.56
RBM39-235ENST00000490354 KATNBL1Q9H079 304 aa5.3□□□□□ -1.56
RBM39-235ENST00000490354 ZNF277Q9NRM2 450 aaPredicted RBP5.3□□□□□ -1.56
RBM39-235ENST00000490354 ATP8A2Q9NTI2 1148 aa5.3□□□□□ -1.56
RBM39-235ENST00000490354 ARHGAP20Q9P2F6 1191 aa5.3□□□□□ -1.56
RBM39-235ENST00000490354 ANAPC4Q9UJX5 808 aa5.3□□□□□ -1.56
RBM39-235ENST00000490354 PTPN22Q9Y2R2 807 aa5.3□□□□□ -1.56
RBM39-235ENST00000490354 MYO3BQ8WXR4 1341 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 E7EWF7 191 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 ZNF888P0CJ79 500 aaPredicted RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 ATF4P18848 351 aaPredicted RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 CASTP20810 708 aaKnown RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 RPS6KB1P23443 525 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 TDO2P48775 406 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 NT5C2P49902 561 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 RHBDL3P58872 404 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 EXOSC10Q01780 885 aaKnown RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 ANKRD1Q15327 319 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 ADCK5Q3MIX3 580 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 SBK1Q52WX2 424 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 USP39Q53GS9 565 aaKnown RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 APOBEC3HQ6NTF7 200 aaKnown RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 BLOC1S2Q6QNY1 142 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 STOX1Q6ZVD7 989 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 OTOP3Q7RTS5 596 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 NIM1KQ8IY84 436 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 FUKQ8N0W3 1084 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 JDP2Q8WYK2 163 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 TEKT1Q969V4 418 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 NEIL1Q96FI4 390 aaPredicted RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 GMLQ99445 158 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 NOL10Q9BSC4 688 aaKnown RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 MXD3Q9BW11 206 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 UPF3BQ9BZI7 483 aaKnown RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 TGIF2Q9GZN2 237 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 NAPBQ9H115 298 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 RNF41Q9H4P4 317 aaPredicted RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 GPR27Q9NS67 375 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 PDRG1Q9NUG6 133 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 AATFQ9NY61 560 aaKnown RBP eCLIP5.29□□□□□ -1.56
RBM39-235ENST00000490354 C11orf21Q9P2W6 132 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 GOLGB1Q14789 3259 aaKnown RBP5.29□□□□□ -1.56
RBM39-235ENST00000490354 LAMB2P55268 1798 aa5.29□□□□□ -1.56
RBM39-235ENST00000490354 FZD9O00144 591 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 PSMD14O00487 310 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 IL18BPO95998 194 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 FGRP09769 529 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 PCP11498 1178 aaKnown RBP5.28□□□□□ -1.56
RBM39-235ENST00000490354 COL6A2P12110 1019 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 COMTP21964 271 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 BTDP43251 543 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 HAND2P61296 217 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 PFKPQ01813 784 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 CXCL9Q07325 125 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 MAP4K2Q12851 820 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 TRDNQ13061 729 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 USP10Q14694 798 aaKnown RBP5.28□□□□□ -1.56
RBM39-235ENST00000490354 AKNAD1Q5T1N1 836 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 AGBL4Q5VU57 503 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 CD276Q5ZPR3 534 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 CTR9Q6PD62 1173 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 REXO1L1PQ8IX06 675 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 AGBL3Q8NEM8 1001 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 NCOA7Q8NI08 942 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 SDR42E1Q8WUS8 393 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 KCTD13Q8WZ19 329 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 EDAQ92838 391 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 EXTL1Q92935 676 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 AGXT2Q9BYV1 514 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 CSRNP2Q9H175 543 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 ARPP21Q9UBL0 812 aaPredicted RBP5.28□□□□□ -1.56
RBM39-235ENST00000490354 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 TELO2Q9Y4R8 837 aa5.28□□□□□ -1.56
RBM39-235ENST00000490354 UTRNP46939 3433 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 WDR19Q8NEZ3 1342 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 H0Y858 1186 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 WDHD1O75717 1129 aaPredicted RBP5.27□□□□□ -1.57
RBM39-235ENST00000490354 RAD17O75943 681 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 ZNF202O95125 648 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 SLC3A2P08195 630 aaKnown RBP5.27□□□□□ -1.57
RBM39-235ENST00000490354 ENO2P09104 434 aaPredicted RBP5.27□□□□□ -1.57
RBM39-235ENST00000490354 CPA1P15085 419 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 RPS12P25398 132 aaKnown RBP5.27□□□□□ -1.57
RBM39-235ENST00000490354 MCM5P33992 734 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 EVCP57679 992 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 PPP2R2AP63151 447 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 PPARAQ07869 468 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 ABHD18Q0P651 414 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 CUL4AQ13619 759 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 TNIP1Q15025 636 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 C12orf60Q5U649 245 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 CDC42EP5Q6NZY7 148 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 MFSD6Q6ZSS7 791 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 USP53Q70EK8 1073 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 TBC1D10CQ8IV04 446 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 AMOTL1Q8IY63 956 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 MB21D2Q8IYB1 491 aaPredicted RBP5.27□□□□□ -1.57
RBM39-235ENST00000490354 TEX11Q8IYF3 940 aa5.27□□□□□ -1.57
RBM39-235ENST00000490354 UHMK1Q8TAS1 419 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms