RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 ZNF564Q8TBZ8 553 aaPredicted RBP17.25■□□□□ 0.35
SNX5-214ENST00000490175 ZNF653Q96CK0 615 aa17.25■□□□□ 0.35
SNX5-214ENST00000490175 TRIM11Q96F44 468 aa17.25■□□□□ 0.35
SNX5-214ENST00000490175 RNPC3Q96LT9 517 aaKnown RBP17.25■□□□□ 0.35
SNX5-214ENST00000490175 AP1M1Q9BXS5 423 aa17.25■□□□□ 0.35
SNX5-214ENST00000490175 GOLGA6BA6NDN3 693 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 SYF2O95926 243 aaKnown RBP17.24■□□□□ 0.35
SNX5-214ENST00000490175 HSPA6P17066 643 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 CARSP49589 748 aaKnown RBP17.24■□□□□ 0.35
SNX5-214ENST00000490175 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
SNX5-214ENST00000490175 CUL2Q13617 745 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 TFDP1Q14186 410 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 SURF1Q15526 300 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 ZBTB41Q5SVQ8 909 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 TRIM50Q86XT4 487 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 WDR49Q8IV35 697 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 MREGQ8N565 214 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 GPRC5AQ8NFJ5 357 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 CASKIN2Q8WXE0 1202 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 ACO2Q99798 780 aaKnown RBP17.24■□□□□ 0.35
SNX5-214ENST00000490175 ZSWIM1Q9BR11 485 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 NUP85Q9BW27 656 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 VPS18Q9P253 973 aa17.24■□□□□ 0.35
SNX5-214ENST00000490175 GOLGA6L10A0A0M3HER8 536 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 TULP2O00295 520 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 FAM189A1O60320 539 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 PRKCBP05771 671 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 MYBL1P10243 752 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
SNX5-214ENST00000490175 RNF149Q8NC42 400 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 TSPYL1Q9H0U9 437 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 NFU1Q9UMS0 254 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 CNTN6Q9UQ52 1028 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 TRPC6Q9Y210 931 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 OGTO15294 1046 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 ASAP2O43150 1006 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 UNGP13051 313 aaPredicted RBP17.23■□□□□ 0.35
SNX5-214ENST00000490175 ACO1P21399 889 aaKnown RBP17.23■□□□□ 0.35
SNX5-214ENST00000490175 LMAN1P49257 510 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 MCL1Q07820 350 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 ZSCAN26Q16670 478 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 PPP1R2P3Q6NXS1 205 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 TRIM72Q6ZMU5 477 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 IFT81Q8WYA0 676 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 ALG3Q92685 438 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 DDX47Q9H0S4 455 aaKnown RBP17.23■□□□□ 0.35
SNX5-214ENST00000490175 AVENQ9NQS1 362 aaPredicted RBP17.23■□□□□ 0.35
SNX5-214ENST00000490175 FAN1Q9Y2M0 1017 aa17.23■□□□□ 0.35
SNX5-214ENST00000490175 ZSCAN5CA6NGD5 496 aaPredicted RBP17.22■□□□□ 0.35
SNX5-214ENST00000490175 CLTAP09496 248 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 SRGAP2CP0DJJ0 459 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 COMTP21964 271 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 GGCXP38435 758 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 MESDQ14696 234 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 ARMCX2Q7L311 632 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 CD101Q93033 1021 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 TCHPQ9BT92 498 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 IMPG2Q9BZV3 1241 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 ERAP1Q9NZ08 941 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
SNX5-214ENST00000490175 ESYT3A0FGR9 886 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 AGPSO00116 658 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 PHACTR2O75167 634 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 CETPP11597 493 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ITGA4P13612 1032 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 CTNNA2P26232 953 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 PEX5P50542 639 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 PTENP60484 403 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 NOP14P78316 857 aaKnown RBP17.21■□□□□ 0.35
SNX5-214ENST00000490175 LAMC2Q13753 1193 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 NCOA4Q13772 614 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 TSHZ1Q6ZSZ6 1077 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ABRAQ8N0Z2 381 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ELMO3Q96BJ8 720 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 FAM84AQ96KN4 292 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 APOBEC3GQ9HC16 384 aaKnown RBP17.21■□□□□ 0.35
SNX5-214ENST00000490175 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 CNOT8Q9UFF9 292 aaKnown RBP17.21■□□□□ 0.35
SNX5-214ENST00000490175 PLXNB2O15031 1838 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ACKR2O00590 384 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ABLIM1O14639 778 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ATMINO43313 823 aaPredicted RBP17.21■□□□□ 0.35
SNX5-214ENST00000490175 OPA1O60313 960 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 HSF2BPO75031 334 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 RNF40O75150 1001 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 CYP1A1P04798 512 aaPredicted RBP17.21■□□□□ 0.35
SNX5-214ENST00000490175 CYP2C8P10632 490 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 PROZP22891 400 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 CTNNA1P35221 906 aaKnown RBP17.21■□□□□ 0.35
SNX5-214ENST00000490175 GYS2P54840 703 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 CENPCQ03188 943 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ZNF792Q3KQV3 632 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 MCOLN2Q8IZK6 566 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 SEC14L1Q92503 715 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 COPS5Q92905 334 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms