RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CHKAP35790 457 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 TDRD10Q5VZ19 366 aaKnown RBP16.79■□□□□ 0.28
BRD9-208ENST00000489816 NIPA1Q7RTP0 329 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 C12orf56Q8IXR9 622 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
BRD9-208ENST00000489816 KIFAP3Q92845 792 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 CD101Q93033 1021 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 HAUS1Q96CS2 278 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 ZBED3Q96IU2 234 aaPredicted RBP16.79■□□□□ 0.28
BRD9-208ENST00000489816 CABS1Q96KC9 395 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 WNT8AQ9H1J5 351 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 R3HDMLQ9H3Y0 253 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 GTF3C4Q9UKN8 822 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 BHMG1C9JSJ3 638 aaPredicted RBP16.79■□□□□ 0.28
BRD9-208ENST00000489816 P4HA2O15460 535 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 GPC3P51654 580 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 OR5B17Q8NGF7 314 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 ZNF214Q9UL59 606 aaPredicted RBP16.79■□□□□ 0.28
BRD9-208ENST00000489816 PCDHB4Q9Y5E5 795 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 PCDHA3Q9Y5H8 950 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 ZNF541Q9H0D2 1346 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 EDN1P05305 212 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 TCF4P15884 667 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 DSG3P32926 999 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 DHX34Q14147 1143 aaKnown RBP16.79■□□□□ 0.28
BRD9-208ENST00000489816 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
BRD9-208ENST00000489816 ECEL1O95672 775 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 KRT10P13645 584 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 CALCOCO2Q13137 446 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 SIX1Q15475 284 aaPredicted RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 KYNUQ16719 465 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 WDR44Q5JSH3 913 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 MTRF1LQ9UGC7 380 aaKnown RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 AGO2Q9UKV8 859 aaKnown RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 K7ERI5 159 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 NFKBIEO00221 500 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 PSAPP07602 524 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 RALAP11233 206 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 PTPRAP18433 802 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 CTNNA2P26232 953 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 NSFP46459 744 aaKnown RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 ANKS1BQ7Z6G8 1248 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRD9-208ENST00000489816 RPS6KC1Q96S38 1066 aa16.78■□□□□ 0.28
BRD9-208ENST00000489816 APOBEC3GQ9HC16 384 aaKnown RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 DIS3Q9Y2L1 958 aaKnown RBP16.78■□□□□ 0.28
BRD9-208ENST00000489816 FAM187AA6NFU0 413 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 STBD1O95210 358 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 CYP1A2P05177 515 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 ATP4AP20648 1035 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 CLEC16AQ2KHT3 1053 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 POTEAQ6S8J7 498 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 FMNL3Q8IVF7 1028 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 ANKRD42Q8N9B4 389 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 MFSD14AQ96MC6 490 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 PPP1R16BQ96T49 567 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 PRMT1Q99873 361 aaKnown RBP16.77■□□□□ 0.28
BRD9-208ENST00000489816 TXLNGYQ9BZA5 131 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 ATP6V0A4Q9HBG4 840 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 CD2APQ9Y5K6 639 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 MROH7Q68CQ1 1323 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 SRGAP2CP0DJJ0 459 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 TNFSF9P41273 254 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 TAS2R40P59535 323 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 STRN3Q13033 797 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 EMC2Q15006 297 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 DALRD3Q5D0E6 543 aaKnown RBP16.77■□□□□ 0.28
BRD9-208ENST00000489816 SCARA5Q6ZMJ2 495 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 MCOLN2Q8IZK6 566 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 ANKRD35Q8N283 1001 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 CYP39A1Q9NYL5 469 aa16.77■□□□□ 0.28
BRD9-208ENST00000489816 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
BRD9-208ENST00000489816 CSDE1O75534 798 aaKnown RBP16.77■□□□□ 0.27
BRD9-208ENST00000489816 DGAT1O75907 488 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 PIAS1O75925 651 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 GJB1P08034 283 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 VIMP08670 466 aaKnown RBP16.77■□□□□ 0.27
BRD9-208ENST00000489816 ADCY8P40145 1251 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 ADCY2Q08462 1091 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 TRIM50Q86XT4 487 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 MTMR14Q8NCE2 650 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 DEPTORQ8TB45 409 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 SEC16BQ96JE7 1060 aa16.77■□□□□ 0.27
BRD9-208ENST00000489816 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
BRD9-208ENST00000489816 THAP12O43422 761 aa16.76■□□□□ 0.27
BRD9-208ENST00000489816 RPL7AP62424 266 aaKnown RBP16.76■□□□□ 0.27
BRD9-208ENST00000489816 ORC1Q13415 861 aa16.76■□□□□ 0.27
BRD9-208ENST00000489816 EIF1ADQ8N9N8 165 aaKnown RBP16.76■□□□□ 0.27
BRD9-208ENST00000489816 C9orf72Q96LT7 481 aa16.76■□□□□ 0.27
BRD9-208ENST00000489816 MSTO1Q9BUK6 570 aa16.76■□□□□ 0.27
BRD9-208ENST00000489816 ST6GALNAC4Q9H4F1 302 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms