RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 ADH1AP07327 375 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
GGPS1-207ENST00000489692 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-207ENST00000489692 TXLNAP40222 546 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 GLUD2P49448 558 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 PEX3P56589 373 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 FANCCQ00597 558 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 DMP1Q13316 513 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-207ENST00000489692 KCNC3Q14003 757 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 E2F4Q16254 413 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 FAM187BQ17R55 369 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 USP49Q70CQ1 688 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 TAS1R1Q7RTX1 841 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 GLYCTKQ8IVS8 523 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 ENOX1Q8TC92 643 aaKnown RBP12.87□□□□□ -0.35
GGPS1-207ENST00000489692 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 FBXL18Q96ME1 805 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 GSDMAQ96QA5 445 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 HSD3B7Q9H2F3 369 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 IRAK3Q9Y616 596 aa12.87□□□□□ -0.35
GGPS1-207ENST00000489692 LOXHD1Q8IVV2 1947 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 F8W810 466 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 RECQL4O94761 1208 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
GGPS1-207ENST00000489692 BMP6P22004 513 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 DSC1Q08554 894 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 DPYDQ12882 1025 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 IL17AQ16552 155 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 DCAF4L1Q3SXM0 396 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 EEF1DP3Q658K8 133 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 FUT10Q6P4F1 479 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 CEP57Q86XR8 500 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 LRRC8AQ8IWT6 810 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 IQUBQ8NA54 791 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 TDRD5Q8NAT2 981 aaKnown RBP12.86□□□□□ -0.35
GGPS1-207ENST00000489692 SLC22A17Q8WUG5 538 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 CACTINQ8WUQ7 758 aaKnown RBP12.86□□□□□ -0.35
GGPS1-207ENST00000489692 RIN2Q8WYP3 895 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-207ENST00000489692 EDAQ92838 391 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 DHX58Q96C10 678 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 PAGE5Q96GU1 130 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 B3GALT6Q96L58 329 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 RUSC1Q9BVN2 902 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
GGPS1-207ENST00000489692 POMKQ9H5K3 350 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 SFXN1Q9H9B4 322 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 KCND1Q9NSA2 647 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 IFNKQ9P0W0 207 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 NCOR1O75376 2440 aa12.86□□□□□ -0.35
GGPS1-207ENST00000489692 A0A087X0B3 334 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 INPPL1O15357 1258 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 GLUD1P00367 558 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 MYL1P05976 194 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 THP07101 528 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 MATR3P43243 847 aaKnown RBP eCLIP12.85□□□□□ -0.35
GGPS1-207ENST00000489692 CLCN4P51793 760 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 YARSP54577 528 aaKnown RBP12.85□□□□□ -0.35
GGPS1-207ENST00000489692 OSTNP61366 133 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 ZXDAP98168 799 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 TUSC3Q13454 348 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 HSP90AA2PQ14568 343 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-207ENST00000489692 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 PDILTQ8N807 584 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 PBXIP1Q96AQ6 731 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 AK8Q96MA6 479 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 MFSD14AQ96MC6 490 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 CACNG4Q9UBN1 327 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 DPP7Q9UHL4 492 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 ADAM28Q9UKQ2 775 aa12.85□□□□□ -0.35
GGPS1-207ENST00000489692 SF3B1O75533 1304 aaKnown RBP eCLIP12.85□□□□□ -0.359e-6■■■■■ 68.9
GGPS1-207ENST00000489692 FNDC1Q4ZHG4 1894 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-207ENST00000489692 TMEM221A6NGB7 291 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 C2CD4DB7Z1M9 353 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 M0R296 226 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 TEX28O15482 410 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 ZNF18P17022 549 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 NPTX2P47972 431 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 STRN3Q13033 797 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 ZNF568Q3ZCX4 644 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 GLRA4Q5JXX5 417 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 RINT1Q6NUQ1 792 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 TRIM67Q6ZTA4 783 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
GGPS1-207ENST00000489692 CCDC149Q6ZUS6 474 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms