RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 KCNJ12Q14500 433 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 KRT31Q15323 416 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 SHHQ15465 462 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 CCDC40Q4G0X9 1142 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 MIIPQ5JXC2 388 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 GLRA4Q5JXX5 417 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 GLB1LQ6UWU2 654 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 C15orf39Q6ZRI6 1047 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 WDR49Q8IV35 697 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 OR5B17Q8NGF7 314 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 CXorf38Q8TB03 319 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 HELQQ8TDG4 1101 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 CASD1Q96PB1 797 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 TMEM117Q9H0C3 514 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 RNF216Q9NWF9 866 aaPredicted RBP11.82□□□□□ -0.52
TFF3-203ENST00000489676 MIOSQ9NXC5 875 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 LIMA1Q9UHB6 759 aaKnown RBP11.82□□□□□ -0.52
TFF3-203ENST00000489676 DERAQ9Y315 318 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 PCDHB7Q9Y5E2 793 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 GBF1Q92538 1859 aa11.82□□□□□ -0.52
TFF3-203ENST00000489676 ZBBXA8MT70 800 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 GJB5O95377 273 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 DLATP10515 647 aaKnown RBP11.81□□□□□ -0.52
TFF3-203ENST00000489676 IBSPP21815 317 aaPredicted RBP11.81□□□□□ -0.52
TFF3-203ENST00000489676 HTRA4P83105 476 aaPredicted RBP11.81□□□□□ -0.52
TFF3-203ENST00000489676 SOX4Q06945 474 aaPredicted RBP11.81□□□□□ -0.52
TFF3-203ENST00000489676 SPAG1Q07617 926 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 DSC1Q08554 894 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 GRIK3Q13003 919 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 TMEM132DQ14C87 1099 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 SURF1Q15526 300 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 MAN2A1Q16706 1144 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 NOMO2Q5JPE7 1267 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 LMBRD2Q68DH5 695 aaPredicted RBP11.81□□□□□ -0.52
TFF3-203ENST00000489676 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 PHOSPHO2Q8TCD6 241 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 ZNF516Q92618 1163 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 CCDC127Q96BQ5 260 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 TSPAN18Q96SJ8 248 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 POP1Q99575 1024 aaKnown RBP11.81□□□□□ -0.52
TFF3-203ENST00000489676 MTIF3Q9H2K0 278 aaKnown RBP11.81□□□□□ -0.52
TFF3-203ENST00000489676 INTS13Q9NVM9 706 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 LRFN2Q9ULH4 789 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 SLC4A7Q9Y6M7 1214 aa11.81□□□□□ -0.52
TFF3-203ENST00000489676 TRANK1O15050 2925 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 CDH23Q9H251 3354 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 LRRC10BA6NIK2 292 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 GOLGA6L19H0YKK7 550 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 UPP2O95045 317 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 KRT13P13646 458 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 GTF2H1P32780 548 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 ZACNQ401N2 412 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 DCAF17Q5H9S7 520 aaPredicted RBP11.8□□□□□ -0.52
TFF3-203ENST00000489676 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 TDRD10Q5VZ19 366 aaKnown RBP11.8□□□□□ -0.52
TFF3-203ENST00000489676 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 C1orf127Q8N9H9 656 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 SP7Q8TDD2 431 aaPredicted RBP11.8□□□□□ -0.52
TFF3-203ENST00000489676 C18orf25Q96B23 403 aaPredicted RBP11.8□□□□□ -0.52
TFF3-203ENST00000489676 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 RNPC3Q96LT9 517 aaKnown RBP11.8□□□□□ -0.52
TFF3-203ENST00000489676 RPS6KC1Q96S38 1066 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 MTMR12Q9C0I1 747 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 TAB2Q9NYJ8 693 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 MAGEC2Q9UBF1 373 aaPredicted RBP11.8□□□□□ -0.52
TFF3-203ENST00000489676 HCSTQ9UBK5 93 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 SIX4Q9UIU6 781 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 UBQLN1Q9UMX0 589 aaKnown RBP11.8□□□□□ -0.52
TFF3-203ENST00000489676 INPP5FQ9Y2H2 1132 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 SZT2Q5T011 3432 aa11.8□□□□□ -0.52
TFF3-203ENST00000489676 FSD2A1L4K1 749 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 PMM2O15305 246 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 POMCP01189 267 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 C4BPAP04003 597 aaKnown RBP11.79□□□□□ -0.52
TFF3-203ENST00000489676 THP07101 528 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 ATP2A2P16615 1042 aaKnown RBP11.79□□□□□ -0.52
TFF3-203ENST00000489676 CYP3A5P20815 502 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 LRPAP1P30533 357 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 MTIF2P46199 727 aaKnown RBP11.79□□□□□ -0.52
TFF3-203ENST00000489676 GCLMP48507 274 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 FMO5P49326 533 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 COPB1P53618 953 aaKnown RBP11.79□□□□□ -0.52
TFF3-203ENST00000489676 AP3M2P53677 418 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 SCARA3Q6AZY7 606 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 FAM109BQ6ICB4 259 aaPredicted RBP11.79□□□□□ -0.52
TFF3-203ENST00000489676 SV2AQ7L0J3 742 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 USP37Q86T82 979 aa11.79□□□□□ -0.52
TFF3-203ENST00000489676 CMTR2Q8IYT2 770 aaKnown RBP11.79□□□□□ -0.52
TFF3-203ENST00000489676 ABI1Q8IZP0 508 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms