RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 APEX2Q9UBZ4 518 aa15.31■□□□□ 0.04
VPS26A-205ENST00000489656 TLR3O15455 904 aaKnown RBP15.3■□□□□ 0.04
VPS26A-205ENST00000489656 ACTN1P12814 892 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 JAM2P57087 298 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 POLR2FP61218 127 aaKnown RBP15.3■□□□□ 0.04
VPS26A-205ENST00000489656 OSTNP61366 133 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 CDK17Q00537 523 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 PAK2Q13177 524 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 BFSP2Q13515 415 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 DSC3Q14574 896 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 MEA1Q16626 185 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 DUOXA2Q1HG44 320 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 SMYD5Q6GMV2 418 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 SLC39A5Q6ZMH5 540 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 EFCAB13Q8IY85 973 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 TAS1R2Q8TE23 839 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 ALPK3Q96L96 1907 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 BAG1Q99933 345 aaPredicted RBP15.3■□□□□ 0.04
VPS26A-205ENST00000489656 TRIM6Q9C030 488 aaPredicted RBP15.3■□□□□ 0.04
VPS26A-205ENST00000489656 AGO3Q9H9G7 860 aaKnown RBP15.3■□□□□ 0.04
VPS26A-205ENST00000489656 RAB20Q9NX57 234 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.3■□□□□ 0.04
VPS26A-205ENST00000489656 PADI3Q9ULW8 664 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 PLAGL2Q9UPG8 496 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 DERAQ9Y315 318 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 C2CD2Q9Y426 696 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
VPS26A-205ENST00000489656 LACTBL1A8MY62 500 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 VNN1O95497 513 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 HLA-DRAP01903 254 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 SKILP12757 684 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 SELPP16109 830 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 TSR1Q2NL82 804 aaKnown RBP15.29■□□□□ 0.04
VPS26A-205ENST00000489656 XKR4Q5GH76 650 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 LMBRD2Q68DH5 695 aaPredicted RBP15.29■□□□□ 0.04
VPS26A-205ENST00000489656 IQCEQ6IPM2 695 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 ALKAL1Q6UXT8 129 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 ZSCAN30Q86W11 494 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 TMTC1Q8IUR5 882 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 OR5B17Q8NGF7 314 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 SEMA4DQ92854 862 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 ANKRD36BP1Q96IX9 119 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 SNX27Q96L92 541 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 FAM81BQ96LP2 452 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
VPS26A-205ENST00000489656 LRRC53A6NM62 1247 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 ARHGAP6O43182 974 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 TNNC2P02585 160 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 TMEM191BP0C7N4 346 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 GHRP10912 638 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 CD52P31358 61 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 RAB27AP51159 221 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
VPS26A-205ENST00000489656 APBA1Q02410 837 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 MBTPS1Q14703 1052 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
VPS26A-205ENST00000489656 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 WDR59Q6PJI9 974 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 CYP26C1Q6V0L0 522 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 FMNL3Q8IVF7 1028 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
VPS26A-205ENST00000489656 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 NT5C1BQ96P26 610 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 MTMR12Q9C0I1 747 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 NXF3Q9H4D5 531 aaKnown RBP15.28■□□□□ 0.04
VPS26A-205ENST00000489656 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 CNTN3Q9P232 1028 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 IPPQ9Y573 584 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 LTBP2Q14767 1821 aa15.28■□□□□ 0.04
VPS26A-205ENST00000489656 ZNF623O75123 536 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 RECQL4O94761 1208 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 NFICP08651 508 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 ZSCAN20P17040 1043 aaPredicted RBP15.27■□□□□ 0.04
VPS26A-205ENST00000489656 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 GCNT1Q02742 428 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.04
VPS26A-205ENST00000489656 BIRC3Q13489 604 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 TMEM132DQ14C87 1099 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 SFMBT2Q5VUG0 894 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 JADE1Q6IE81 842 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 LRRC8DQ7L1W4 858 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 ENOSF1Q7L5Y1 443 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 MRPL10Q7Z7H8 261 aaKnown RBP15.27■□□□□ 0.04
VPS26A-205ENST00000489656 HACE1Q8IYU2 909 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 OSBPL7Q9BZF2 842 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 FAM105AQ9NUU6 356 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.04
VPS26A-205ENST00000489656 DNAJC12Q9UKB3 198 aa15.27■□□□□ 0.04
VPS26A-205ENST00000489656 AJAP1Q9UKB5 411 aaPredicted RBP15.27■□□□□ 0.04
VPS26A-205ENST00000489656 TTC3P53804 2025 aa15.27■□□□□ 0.03
VPS26A-205ENST00000489656 DCDC2CA8MYV0 355 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 LRRN2O75325 713 aa15.26■□□□□ 0.03
VPS26A-205ENST00000489656 PARNO95453 639 aaKnown RBP15.26■□□□□ 0.03
VPS26A-205ENST00000489656 ASS1P00966 412 aaKnown RBP15.26■□□□□ 0.03
VPS26A-205ENST00000489656 SKIP12755 728 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms