RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TMEM140Q9NV12 185 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 MOCS1Q9NZB8 636 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 DKK2Q9UBU2 259 aa4.95□□□□□ -1.62
RFC4-213ENST00000489028 USP15Q9Y4E8 981 aaPredicted RBP4.95□□□□□ -1.62
RFC4-213ENST00000489028 MYBBP1AQ9BQG0 1328 aaKnown RBP4.95□□□□□ -1.62
RFC4-213ENST00000489028 MARCH11A6NNE9 402 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 ITGB1P05556 798 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 PTGS2P35354 604 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 BEAN1Q3B7T3 259 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 PNMA8AQ86V59 439 aaPredicted RBP4.94□□□□□ -1.62
RFC4-213ENST00000489028 DRC7Q8IY82 874 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 AMER2Q8N7J2 671 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 OR56A1Q8NGH5 318 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 IFI44Q8TCB0 444 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 KAT5Q92993 513 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 MYEOVQ96EZ4 313 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 CYFIP2Q96F07 1278 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 ADAM2Q99965 735 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 MANSC1Q9H8J5 431 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 KLHL11Q9NVR0 708 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 MAP3K2Q9Y2U5 619 aa4.94□□□□□ -1.62
RFC4-213ENST00000489028 NOP58Q9Y2X3 529 aaKnown RBP4.94□□□□□ -1.62
RFC4-213ENST00000489028 TCRBV7S2A1N4TA0A589 114 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 TMEM200CA6NKL6 621 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 RNASET2O00584 256 aaKnown RBP4.93□□□□□ -1.62
RFC4-213ENST00000489028 NDUFA10O95299 355 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 ELANEP08246 267 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 SLC6A4P31645 630 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 UBXN2BQ14CS0 331 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 PCSK4Q6UW60 755 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 PLXDC1Q8IUK5 500 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 VRK3Q8IV63 474 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 RHOT2Q8IXI1 618 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 PROKR1Q8TCW9 393 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 STAG1Q8WVM7 1258 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 TMX3Q96JJ7 454 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 DMRTA2Q96SC8 542 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 ZSWIM1Q9BR11 485 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 FAM30AQ9NZY2 134 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 ANKFY1Q9P2R3 1169 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 PCDHB1Q9Y5F3 818 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 MRFAP1Q9Y605 127 aa4.93□□□□□ -1.62
RFC4-213ENST00000489028 GAGE12BA1L429 117 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 GAGE12HA6NDE8 117 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 DIRC3C9JPN6 131 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 POMCP01189 267 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 SBK3P0C264 359 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 LAG3P18627 525 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 SLC16A1P53985 500 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 CTXN1P60606 82 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 CDC42EP1Q00587 391 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 UAP1L1Q3KQV9 507 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 TIGD2Q4W5G0 525 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 EFCAB2Q5VUJ9 269 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 TSHZ3Q63HK5 1081 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 KCNV1Q6PIU1 500 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 MIGA2Q7L4E1 593 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 ULK2Q8IYT8 1036 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 SYNE4Q8N205 404 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
RFC4-213ENST00000489028 HDAC10Q969S8 669 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 MRGPRX4Q96LA9 322 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 IKZF4Q9H2S9 585 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 TDP1Q9NUW8 608 aa4.92□□□□□ -1.62
RFC4-213ENST00000489028 SAP30BPQ9UHR5 308 aaKnown RBP4.92□□□□□ -1.62
RFC4-213ENST00000489028 GRID2IPA4D2P6 1211 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 UNC119BA6NIH7 251 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 KIAA0391O15091 583 aaKnown RBP4.91□□□□□ -1.62
RFC4-213ENST00000489028 TEX33O43247 280 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 ABHD16AO95870 558 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 CFIP05156 583 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 GCSHP23434 173 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 HMGA2P52926 109 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 ADKP55263 362 aaKnown RBP4.91□□□□□ -1.62
RFC4-213ENST00000489028 ZNF280AP59817 542 aaPredicted RBP4.91□□□□□ -1.62
RFC4-213ENST00000489028 DSC2Q02487 901 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 OCA2Q04671 838 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 DACT2Q5SW24 774 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 B3GNTL1Q67FW5 361 aaPredicted RBP4.91□□□□□ -1.62
RFC4-213ENST00000489028 CMTR2Q8IYT2 770 aaKnown RBP4.91□□□□□ -1.62
RFC4-213ENST00000489028 CHFRQ96EP1 664 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 C11orf54Q9H0W9 315 aaPredicted RBP4.91□□□□□ -1.62
RFC4-213ENST00000489028 USP25Q9UHP3 1055 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 FPGT-TNNI3KV9GXZ4 949 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 AATKQ6ZMQ8 1374 aa4.91□□□□□ -1.62
RFC4-213ENST00000489028 A0A1B0GTW7 788 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 CDHR4A6H8M9 788 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 SGTAO43765 313 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 FGFR4P22455 802 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 BMPR1AP36894 532 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 FXR1P51114 621 aaKnown RBP eCLIP4.9□□□□□ -1.63
RFC4-213ENST00000489028 NOMO3P69849 1222 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 DPTQ07507 201 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 SLFN5Q08AF3 891 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 RESTQ13127 1097 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 TP53BP2Q13625 1128 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 FLYWCH1Q4VC44 716 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.63
RFC4-213ENST00000489028 LY6G5CQ5SRR4 150 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms