RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 OR5B17Q8NGF7 314 aa17.33■□□□□ 0.36
CLDN11-208ENST00000488989 LMO3Q8TAP4 145 aa17.33■□□□□ 0.36
CLDN11-208ENST00000488989 FAM212AQ96EL1 285 aa17.33■□□□□ 0.36
CLDN11-208ENST00000488989 UBN1Q9NPG3 1134 aa17.33■□□□□ 0.36
CLDN11-208ENST00000488989 PARP2Q9UGN5 583 aa17.33■□□□□ 0.36
CLDN11-208ENST00000488989 NFICP08651 508 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 EXOC3L4Q17RC7 722 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 FIGNQ5HY92 759 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 TDRD10Q5VZ19 366 aaKnown RBP17.32■□□□□ 0.36
CLDN11-208ENST00000488989 LMBRD2Q68DH5 695 aaPredicted RBP17.32■□□□□ 0.36
CLDN11-208ENST00000488989 SPECC1LQ69YQ0 1117 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 JADE1Q6IE81 842 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 ANKRD36BP1Q96IX9 119 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 ZMAT2Q96NC0 199 aaKnown RBP17.32■□□□□ 0.36
CLDN11-208ENST00000488989 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 APOL6Q9BWW8 343 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 CXCL16Q9H2A7 254 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 PLCB1Q9NQ66 1216 aa17.32■□□□□ 0.36
CLDN11-208ENST00000488989 FNDC1Q4ZHG4 1894 aaPredicted RBP17.32■□□□□ 0.36
CLDN11-208ENST00000488989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.31■□□□□ 0.36
CLDN11-208ENST00000488989 MEIS3P2A8K0S8 358 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 CSF2RAP15509 400 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 PON1P27169 355 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 CETN1Q12798 172 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 TBX2Q13207 712 aaPredicted RBP17.31■□□□□ 0.36
CLDN11-208ENST00000488989 TMEM132DQ14C87 1099 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 TRAPPC11Q7Z392 1133 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 DEFB128Q7Z7B8 93 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 RPUSD2Q8IZ73 545 aaKnown RBP17.31■□□□□ 0.36
CLDN11-208ENST00000488989 CRIPAKQ8N1N5 446 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 EHBP1Q8NDI1 1231 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 GSTCDQ8NEC7 633 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 FBXL13Q8NEE6 735 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
CLDN11-208ENST00000488989 IQCDQ96DY2 449 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 MTMR12Q9C0I1 747 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 MMRN2Q9H8L6 949 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 GCNT4Q9P109 453 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.31■□□□□ 0.36
CLDN11-208ENST00000488989 SCN1AP35498 2009 aa17.31■□□□□ 0.36
CLDN11-208ENST00000488989 PTPRSQ13332 1948 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 SMIM28A0A1B0GU29 152 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 ABHD14A-ACY1A0A1B0GW23 586 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 PTGESO14684 152 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 VNN1O95497 513 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 TNNC2P02585 160 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 TMEM191BP0C7N4 346 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 SLC9A1P19634 815 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 CYP3A5P20815 502 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 TFAMQ00059 246 aaKnown RBP17.3■□□□□ 0.36
CLDN11-208ENST00000488989 CCDC173Q0VFZ6 552 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 IKBKEQ14164 716 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 PTPN21Q16825 1174 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 TMC6Q7Z403 805 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 TAS1R2Q8TE23 839 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 LPPQ93052 612 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 KIF12Q96FN5 646 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 PPP1R10Q96QC0 940 aaKnown RBP17.3■□□□□ 0.36
CLDN11-208ENST00000488989 CRACR2AQ9BSW2 395 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 NUP58Q9BVL2 599 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 TTYH3Q9C0H2 523 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 SIX2Q9NPC8 291 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 IL23AQ9NPF7 189 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 RNF19AQ9NV58 838 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
CLDN11-208ENST00000488989 RAB20Q9NX57 234 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 KLK14Q9P0G3 267 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 IMPACTQ9P2X3 320 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 PRKAG2Q9UGJ0 569 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 FBXL5Q9UKA1 691 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 UBQLN1Q9UMX0 589 aaKnown RBP17.3■□□□□ 0.36
CLDN11-208ENST00000488989 DAAM1Q9Y4D1 1078 aa17.3■□□□□ 0.36
CLDN11-208ENST00000488989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLDN11-208ENST00000488989 XPOTO43592 962 aaKnown RBP17.29■□□□□ 0.36
CLDN11-208ENST00000488989 EFCAB14O75071 495 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 OFD1O75665 1012 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 HLA-DRAP01903 254 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 KLK7P49862 253 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 PPIGQ13427 754 aaKnown RBP eCLIP17.29■□□□□ 0.36
CLDN11-208ENST00000488989 TRIM14Q14142 442 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 TRIM65Q6PJ69 517 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 C1orf127Q8N9H9 656 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 RSPH1Q8WYR4 309 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 SEMA4DQ92854 862 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 FAM84AQ96KN4 292 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 GAD1Q99259 594 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 LSM14BQ9BX40 385 aaKnown RBP17.29■□□□□ 0.36
CLDN11-208ENST00000488989 EDEM3Q9BZQ6 932 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 INTS2Q9H0H0 1204 aaKnown RBP17.29■□□□□ 0.36
CLDN11-208ENST00000488989 GANQ9H2C0 597 aa17.29■□□□□ 0.36
CLDN11-208ENST00000488989 ARL5CA6NH57 179 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 ZC3H11AO75152 810 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLDN11-208ENST00000488989 NOL4O94818 638 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 MLH1P40692 756 aa17.28■□□□□ 0.36
CLDN11-208ENST00000488989 BIRC3Q13489 604 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms