RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MFSD14AQ96MC6 490 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 CXCL16Q9H2A7 254 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 ZDHHC7Q9NXF8 308 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 CNTN3Q9P232 1028 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 RAPGEFL1Q9UHV5 662 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 FBXO2Q9UK22 296 aaPredicted RBP15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 SORCS3Q9UPU3 1222 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 MTMR6Q9Y217 621 aa15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.1■□□□□ 0.01
SPTLC1-207ENST00000488921 CCDC195A0A1B0GUA6 201 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 HNRNPDLO14979 420 aaKnown RBP15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 TGM5O43548 720 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 KCNE1P15382 129 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 LIG4P49917 911 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 MCL1Q07820 350 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 SIGLEC14Q08ET2 396 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 UPP1Q16831 310 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 KANK3Q6NY19 840 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 PRSS55Q6UWB4 352 aaPredicted RBP15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 BMP8AQ7Z5Y6 402 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 GLYCTKQ8IVS8 523 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 HSCBQ8IWL3 235 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 UBALD2Q8IYN6 164 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 KRI1Q8N9T8 703 aaKnown RBP15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 ZHX3Q9H4I2 956 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 TECTAO75443 2155 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 TRIOO75962 3097 aa15.09■□□□□ 0.01
SPTLC1-207ENST00000488921 MYO10Q9HD67 2058 aa15.08■□□□□ 0.01
SPTLC1-207ENST00000488921 TMEM221A6NGB7 291 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 M0R296 226 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 TRAK2O60296 914 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 PAPLNO95428 1278 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 RPL17P18621 184 aaKnown RBP15.08■□□□□ 0
SPTLC1-207ENST00000488921 RPL9P32969 192 aaKnown RBP15.08■□□□□ 0
SPTLC1-207ENST00000488921 DDIT3P35638 169 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 CEBPZQ03701 1054 aaKnown RBP15.08■□□□□ 0
SPTLC1-207ENST00000488921 LIN9Q5TKA1 542 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 HFE2Q6ZVN8 426 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 KREMEN2Q8NCW0 462 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 LNX1Q8TBB1 728 aaPredicted RBP15.08■□□□□ 0
SPTLC1-207ENST00000488921 LRRC15Q8TF66 581 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 SMG7Q92540 1137 aaKnown RBP15.08■□□□□ 0
SPTLC1-207ENST00000488921 EPSTI1Q96J88 318 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 ZBTB45Q96K62 511 aaPredicted RBP15.08■□□□□ 0
SPTLC1-207ENST00000488921 KCNH6Q9H252 994 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 PIDD1Q9HB75 910 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 GOLGA2P5Q9HBQ8 144 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 TBX20Q9UMR3 447 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 ANK1P16157 1881 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 KMT2EQ8IZD2 1858 aa15.08■□□□□ 0
SPTLC1-207ENST00000488921 PODXLO00592 558 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 RFPL2O75678 378 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 PIGRP01833 764 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
SPTLC1-207ENST00000488921 CLTAP09496 248 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 FGFR3P22607 806 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 SPECC1Q5M775 1068 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 RRAGBQ5VZM2 374 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 FAM173BQ6P4H8 233 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 LILRA6Q6PI73 481 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 CCDC73Q6ZRK6 1079 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 ANKS3Q6ZW76 656 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 ZMAT2Q96NC0 199 aaKnown RBP15.07■□□□□ 0
SPTLC1-207ENST00000488921 USP28Q96RU2 1077 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 CLSTN3Q9BQT9 956 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 PLEKHA5Q9HAU0 1116 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 WDR6Q9NNW5 1121 aaKnown RBP15.07■□□□□ 0
SPTLC1-207ENST00000488921 MTRRQ9UBK8 725 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 FBXW11Q9UKB1 542 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 CLUHO75153 1309 aa15.07■□□□□ 0
SPTLC1-207ENST00000488921 OGTO15294 1046 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 XPOTO43592 962 aaKnown RBP15.06■□□□□ 0
SPTLC1-207ENST00000488921 ZMYND10O75800 440 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 SPATA31D3P0C874 917 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 PLA2G5P39877 138 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 GTF2BQ00403 316 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 PPP2R3AQ06190 1150 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 SOX4Q06945 474 aaPredicted RBP15.06■□□□□ 0
SPTLC1-207ENST00000488921 SLC39A14Q15043 492 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 STK38Q15208 465 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 SPATA31D4Q6ZUB0 917 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 SV2BQ7L1I2 683 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 MAP4K3Q8IVH8 894 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 SUGP1Q8IWZ8 645 aaKnown RBP15.06■□□□□ 0
SPTLC1-207ENST00000488921 C3orf58Q8NDZ4 430 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 PBXIP1Q96AQ6 731 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 HVCN1Q96D96 273 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 FAM122AQ96E09 287 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 CLIC6Q96NY7 704 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 TSPAN18Q96SJ8 248 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 PRKD2Q9BZL6 878 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 SEL1LQ9UBV2 794 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 NUB1Q9Y5A7 615 aa15.06■□□□□ 0
SPTLC1-207ENST00000488921 DOCK8Q8NF50 2099 aa15.05■□□□□ 0
SPTLC1-207ENST00000488921 SYN3O14994 580 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms