RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 OR1D2P34982 312 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 SOX4Q06945 474 aaPredicted RBP20.06■□□□□ 0.8
ATG9A-222ENST00000488833 HYIQ5T013 277 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 MPZL3Q6UWV2 235 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 SIX5Q8N196 739 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 CDK5RAP3Q96JB5 506 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 SNX27Q96L92 541 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 TCHPQ9BT92 498 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 SLC38A7Q9NVC3 462 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 MTRRQ9UBK8 725 aa20.06■□□□□ 0.8
ATG9A-222ENST00000488833 I3L4J1 428 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 CCL16O15467 120 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 TRAPPC3O43617 180 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 CFHP08603 1231 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 LAMP2P13473 410 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 FSHRP23945 695 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 TKTP29401 623 aaKnown RBP20.05■□□□□ 0.8
ATG9A-222ENST00000488833 BRCC3P46736 316 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 CLCN5P51795 746 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 UPP1Q16831 310 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 GRASPQ7Z6J2 395 aaPredicted RBP20.05■□□□□ 0.8
ATG9A-222ENST00000488833 C3orf58Q8NDZ4 430 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 SLC7A14Q8TBB6 771 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 ANKFY1Q9P2R3 1169 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 POLIQ9UNA4 740 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 SMC3Q9UQE7 1217 aa20.05■□□□□ 0.8
ATG9A-222ENST00000488833 ABLIM1O14639 778 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 XYLBO75191 536 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 PLS3P13797 630 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 AOC1P19801 751 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 PROZP22891 400 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 HOXA9P31269 272 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 NTHL1P78549 312 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 STRN3Q13033 797 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 RAB33AQ14088 237 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 XKR4Q5GH76 650 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 CD300LGQ6UXG3 332 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 ALKAL1Q6UXT8 129 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 SLC44A3Q8N4M1 653 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 SPIRE2Q8WWL2 714 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 NXPE3Q969Y0 559 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 DDX27Q96GQ7 796 aaKnown RBP20.04■□□□□ 0.8
ATG9A-222ENST00000488833 ACAP3Q96P50 834 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 CDY1Q9Y6F8 540 aa20.04■□□□□ 0.8
ATG9A-222ENST00000488833 PODXLO00592 558 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 PLA2G4BP0C869 781 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 SRFP11831 508 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 NPR3P17342 541 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 RFX1P22670 979 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 SMTNP53814 917 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 HTR4Q13639 388 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 NOLC1Q14978 699 aaKnown RBP eCLIP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 TMEM119Q4V9L6 283 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 AXDND1Q5T1B0 1012 aaPredicted RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 ARL6IP4Q66PJ3 421 aaKnown RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 RSPO2Q6UXX9 243 aaPredicted RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 ANKS3Q6ZW76 656 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 KCTD17Q8N5Z5 321 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 SYT2Q8N9I0 419 aaPredicted RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 TMEM161BQ8NDZ6 487 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 ST13P5Q8NFI4 369 aaPredicted RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 ZBTB45Q96K62 511 aaPredicted RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 ZMAT2Q96NC0 199 aaKnown RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 CNTN3Q9P232 1028 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 BACE2Q9Y5Z0 518 aa20.03■□□□□ 0.8
ATG9A-222ENST00000488833 PDCD11Q14690 1871 aaKnown RBP20.03■□□□□ 0.8
ATG9A-222ENST00000488833 KCNE1P15382 129 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 MCM2P49736 904 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 SLC12A3P55017 1021 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 CACNB1Q02641 598 aaPredicted RBP20.02■□□□□ 0.8
ATG9A-222ENST00000488833 NTPCRQ9BSD7 190 aaKnown RBP20.02■□□□□ 0.8
ATG9A-222ENST00000488833 KCND2Q9NZV8 630 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 WNT16Q9UBV4 365 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 KCNG1Q9UIX4 513 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 CA14Q9ULX7 337 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 ZFP37Q9Y6Q3 630 aaPredicted RBP20.02■□□□□ 0.8
ATG9A-222ENST00000488833 NUMBLQ9Y6R0 609 aa20.02■□□□□ 0.8
ATG9A-222ENST00000488833 NPHP3-ACAD11A0A0J9YXS1 232 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 ANHXE9PGG2 379 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 STK25O00506 426 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 PI15O43692 258 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 TOM1L1O75674 476 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 MAPTP10636 758 aaKnown RBP20.01■□□□□ 0.79
ATG9A-222ENST00000488833 UVSSAQ2YD98 709 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 C18orf25Q96B23 403 aaPredicted RBP20.01■□□□□ 0.79
ATG9A-222ENST00000488833 RTP3Q9BQQ7 232 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 CDH7Q9ULB5 785 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.01■□□□□ 0.79
ATG9A-222ENST00000488833 NUB1Q9Y5A7 615 aa20.01■□□□□ 0.79
ATG9A-222ENST00000488833 KRBA1A5PL33 1030 aa20■□□□□ 0.79
ATG9A-222ENST00000488833 MEFVO15553 781 aaPredicted RBP20■□□□□ 0.79
ATG9A-222ENST00000488833 GFRA3O60609 400 aa20■□□□□ 0.79
ATG9A-222ENST00000488833 POU2F2P09086 479 aa20■□□□□ 0.79
ATG9A-222ENST00000488833 MATR3P43243 847 aaKnown RBP eCLIP20■□□□□ 0.79
ATG9A-222ENST00000488833 SEZ6Q53EL9 994 aa20■□□□□ 0.79
ATG9A-222ENST00000488833 VARS2Q5ST30 1063 aaKnown RBP20■□□□□ 0.79
ATG9A-222ENST00000488833 LARP1BQ659C4 914 aaKnown RBP20■□□□□ 0.79
ATG9A-222ENST00000488833 ZPBP2Q6X784 338 aa20■□□□□ 0.79
ATG9A-222ENST00000488833 GPR152Q8TDT2 470 aa20■□□□□ 0.79
ATG9A-222ENST00000488833 BICD1Q96G01 975 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms