RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PLEKHA5Q9HAU0 1116 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 FAM50BQ9Y247 325 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 SSX2IPQ9Y2D8 614 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 TEX28O15482 410 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 B3GAT3O94766 335 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 CXCL8P10145 99 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 MYBP10242 640 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 HOXB8P17481 243 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 ADSSP30520 456 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 CLCN4P51793 760 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 ZP2Q05996 745 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 ENOX2Q16206 610 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 RTP2Q5QGT7 225 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 ADALQ6DHV7 355 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 C18orf25Q96B23 403 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 UROC1Q96N76 676 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 C7orf25Q9BPX7 421 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 EMILIN2Q9BXX0 1053 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 LRRC27Q9C0I9 530 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 SLC38A7Q9NVC3 462 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 PRKAG3Q9UGI9 489 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 CPSF3Q9UKF6 684 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 KCNH3Q9ULD8 1083 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 USP15Q9Y4E8 981 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 NCOR1O75376 2440 aa17.4■□□□□ 0.38
CTDSP1-209ENST00000488627 SF3B1O75533 1304 aaKnown RBP eCLIP17.4■□□□□ 0.389e-7■■■■■ 57.4
CTDSP1-209ENST00000488627 TCF20Q9UGU0 1960 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 C19orf67A6NJJ6 358 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 LACTBL1A8MY62 500 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 CMA1P23946 247 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 KLRC2P26717 231 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 MATR3P43243 847 aaKnown RBP eCLIP17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 AMPD3Q01432 767 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 KYAT1Q16773 422 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 FAM171A1Q5VUB5 890 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 KIAA1841Q6NSI8 718 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 PPFIBP1Q86W92 1011 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 ADHFE1Q8IWW8 467 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 CCDC65Q8IXS2 484 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 TMEM130Q8N3G9 435 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 GLIS3Q8NEA6 775 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 RIN2Q8WYP3 895 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 HPS3Q969F9 1004 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 DDX27Q96GQ7 796 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 SPATA32Q96LK8 384 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 MSTO1Q9BUK6 570 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 HPSEQ9Y251 543 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
CTDSP1-209ENST00000488627 FAM237AA0A1B0GTK4 181 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 GCNT3O95395 438 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 SRGAP2BP0DMP2 458 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 CASP1P29466 404 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 SPAG1Q07617 926 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 EHHADHQ08426 723 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 SLFN12LQ6IEE8 588 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 KANK3Q6NY19 840 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 PRSS55Q6UWB4 352 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 GJD3Q8N144 294 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 C12orf76Q8N812 135 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 LNX1Q8TBB1 728 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 FEZF2Q8TBJ5 459 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 PIK3R5Q8WYR1 880 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 ACCSQ96QU6 501 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 TTPALQ9BTX7 342 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 APOL5Q9BWW9 433 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 ADAM7Q9H2U9 754 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 MAGEF1Q9HAY2 307 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 FNIP2Q9P278 1114 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 CDH22Q9UJ99 828 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 ATP6V1DQ9Y5K8 247 aa17.38■□□□□ 0.37
CTDSP1-209ENST00000488627 A0A1B0GVL5 298 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 PODXLO00592 558 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 ACTN4O43707 911 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 FGFR3P22607 806 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 RPL9P32969 192 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 HOXD13P35453 343 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 BRCC3P46736 316 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 ELAVL2Q12926 359 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 ALCAMQ13740 583 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 TPRNQ4KMQ1 711 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 LILRA6Q6PI73 481 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 CRELD2Q6UXH1 353 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 KHSRPQ92945 711 aaKnown RBP eCLIP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 FBXL18Q96ME1 805 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 RPF1Q9H9Y2 349 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 DZANK1Q9NVP4 752 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 TUBGCP4Q9UGJ1 667 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
CTDSP1-209ENST00000488627 PRPF6O94906 941 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 C1RP00736 705 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 ADH1AP07327 375 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 SLFN14P0C7P3 912 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 PFKFB1P16118 471 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 RPL17P18621 184 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 ACOT2P49753 483 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms