RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 UBIAD1Q9Y5Z9 338 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 U3KQE9 123 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 COL4A4P53420 1690 aaPredicted RBP6.73□□□□□ -1.33
CDHR3-213ENST00000488386 KAT6AQ92794 2004 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 MYO9BQ13459 2157 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 LOXHD1Q8IVV2 1947 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 PGRP06401 933 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 TGFB3P10600 412 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 SCG2P13521 617 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 RAD51AP2Q09MP3 1159 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 TMEM62Q0P6H9 643 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 ITGB3BPQ13352 177 aaPredicted RBP6.72□□□□□ -1.33
CDHR3-213ENST00000488386 RAB30Q15771 203 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 NTRK3Q16288 839 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 PFKFB3Q16875 520 aaPredicted RBP6.72□□□□□ -1.33
CDHR3-213ENST00000488386 SERINC5Q86VE9 423 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 NT5DC4Q86YG4 428 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 TOP6BLQ8N6T0 577 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 DBF4BQ8NFT6 615 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 CAGE1Q8TC20 777 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 ZNF507Q8TCN5 953 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 LMBR1Q8WVP7 490 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 GJA10Q969M2 543 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 ACSF2Q96CM8 615 aaPredicted RBP6.72□□□□□ -1.33
CDHR3-213ENST00000488386 GPRASP2Q96D09 838 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 AIFM3Q96NN9 605 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 DPH2Q9BQC3 489 aaPredicted RBP6.72□□□□□ -1.33
CDHR3-213ENST00000488386 MXRA8Q9BRK3 442 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 SPON2Q9BUD6 331 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 DUSP23Q9BVJ7 150 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 LRRC3Q9BY71 257 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 MTIF3Q9H2K0 278 aaKnown RBP6.72□□□□□ -1.33
CDHR3-213ENST00000488386 SLC28A3Q9HAS3 691 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 KCNH7Q9NS40 1196 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 BARHL2Q9NY43 387 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 UNC80Q8N2C7 3258 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 MICAL3Q7RTP6 2002 aa6.72□□□□□ -1.33
CDHR3-213ENST00000488386 PRUNE2Q8WUY3 3088 aa6.71□□□□□ -1.33
CDHR3-213ENST00000488386 RSPH10B2B2RC85 870 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 FAM86B1E9PN63 330 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 PRPF3O43395 683 aaKnown RBP6.71□□□□□ -1.34
CDHR3-213ENST00000488386 DNAJA2O60884 412 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 STAM2O75886 525 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 REC8O95072 547 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 MED26O95402 600 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 CCNE2O96020 404 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 CXCL10P02778 98 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 PFKMP08237 780 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 HMGB1P09429 215 aaKnown RBP6.71□□□□□ -1.34
CDHR3-213ENST00000488386 FAM86B2P0C5J1 330 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 RSPH10BP0C881 870 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 ACTN1P12814 892 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 IBSPP21815 317 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-213ENST00000488386 PDIA3P30101 505 aaKnown RBP6.71□□□□□ -1.34
CDHR3-213ENST00000488386 RFC2P35250 354 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 KCNJ6P48051 423 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 CNKSR3Q6P9H4 555 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 RUFY3Q7L099 469 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 HERC6Q8IVU3 1022 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 MYOCDQ8IZQ8 938 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 DNAJB3Q8WWF6 145 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 ARNTL2Q8WYA1 636 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 SEPT1Q8WYJ6 367 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 GLG1Q92896 1179 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 PPP1R16BQ96T49 567 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 OSBPL1AQ9BXW6 950 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 FAM49AQ9H0Q0 323 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-213ENST00000488386 AGO4Q9HCK5 861 aaKnown RBP6.71□□□□□ -1.34
CDHR3-213ENST00000488386 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 GJB4Q9NTQ9 266 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 SLC9A2Q9UBY0 812 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 RNF112Q9ULX5 631 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 PCDHA11Q9Y5I1 949 aa6.71□□□□□ -1.34
CDHR3-213ENST00000488386 TMEM265A0A087WTH1 108 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 EDIL3O43854 480 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 CSPG5O95196 566 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 CHRNA1P02708 482 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 GHRP10912 638 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 PSMA5P28066 241 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 HOXC8P31273 242 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 SREBF1P36956 1147 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 ACTR2P61160 394 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 ADAM17P78536 824 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 TAP1Q03518 808 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 RBL2Q08999 1139 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 PPFIA1Q13136 1202 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 PLCB4Q15147 1175 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 SEZ6Q53EL9 994 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 CEP55Q53EZ4 464 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 MARCH8Q5T0T0 291 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 PRAMEF13Q5VWM6 474 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 XRRA1Q6P2D8 792 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 HID1Q8IV36 788 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 GDPD5Q8WTR4 605 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 SLC9A7Q96T83 725 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 SENP7Q9BQF6 1050 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 AGXT2Q9BYV1 514 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 EHMT1Q9H9B1 1298 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms