RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 MAN1C1Q9NR34 630 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 CNTN3Q9P232 1028 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 PRR33A8MZF0 331 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 HNRNPDLO14979 420 aaKnown RBP12.51□□□□□ -0.41
SPEN-205ENST00000487496 TGM5O43548 720 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 PIGRP01833 764 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 MYBP10242 640 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 PDIA4P13667 645 aaKnown RBP12.51□□□□□ -0.41
SPEN-205ENST00000487496 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
SPEN-205ENST00000487496 MATR3P43243 847 aaKnown RBP eCLIP12.51□□□□□ -0.41
SPEN-205ENST00000487496 LIG4P49917 911 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 GTF2BQ00403 316 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 CREMQ03060 361 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 STK38Q15208 465 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 FOXD4L5Q5VV16 416 aaPredicted RBP12.51□□□□□ -0.41
SPEN-205ENST00000487496 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 C15orf39Q6ZRI6 1047 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 SV2BQ7L1I2 683 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 GLYCTKQ8IVS8 523 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 C3orf58Q8NDZ4 430 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 CMASQ8NFW8 434 aaPredicted RBP12.51□□□□□ -0.41
SPEN-205ENST00000487496 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 FOXD4L4Q8WXT5 416 aaPredicted RBP12.51□□□□□ -0.41
SPEN-205ENST00000487496 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
SPEN-205ENST00000487496 CLSTN3Q9BQT9 956 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 DPP7Q9UHL4 492 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 NR2E1Q9Y466 385 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 C5orf42Q9H799 3197 aa12.51□□□□□ -0.41
SPEN-205ENST00000487496 MYH11P35749 1972 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 A0A087X0B3 334 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 CCDC195A0A1B0GUA6 201 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 MYMKA6NI61 221 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 C2CD4DB7Z1M9 353 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 PODXLO00592 558 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 SPTLC2O15270 562 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 PPP6R2O75170 966 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 RFPL2O75678 378 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 CLTAP09496 248 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
SPEN-205ENST00000487496 FGFR3P22607 806 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 STAT6P42226 847 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 BRCC3P46736 316 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 PSMD5Q16401 504 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
SPEN-205ENST00000487496 ELMSAN1Q6PJG2 1045 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
SPEN-205ENST00000487496 DDX12PQ92771 950 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 EDAQ92838 391 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 C18orf25Q96B23 403 aaPredicted RBP12.5□□□□□ -0.41
SPEN-205ENST00000487496 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 PLEKHA4Q9H4M7 779 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 USTQ9Y2C2 406 aa12.5□□□□□ -0.41
SPEN-205ENST00000487496 A0A0B4J269 797 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 TTC26A0AVF1 554 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 I3L4J1 428 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 ADAM12O43184 909 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 TRAPPC3O43617 180 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 FAM189A1O60320 539 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 CXCL8P10145 99 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 RPL9P32969 192 aaKnown RBP12.49□□□□□ -0.41
SPEN-205ENST00000487496 ABCD1P33897 745 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 TNFSF9P41273 254 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 ZXDAP98168 799 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 KYAT1Q16773 422 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 ZBTB41Q5SVQ8 909 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 SLC39A4Q6P5W5 647 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 PDXDC1Q6P996 788 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 CYP26C1Q6V0L0 522 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 ZNF720Q7Z2F6 126 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 SFR1Q86XK3 245 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 MAP4K3Q8IVH8 894 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 KREMEN2Q8NCW0 462 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 DNAJC19Q96DA6 116 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 PLEKHA5Q9HAU0 1116 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 TRIP11Q15643 1979 aa12.49□□□□□ -0.41
SPEN-205ENST00000487496 ANKRD63C9JTQ0 380 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 OGTO15294 1046 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 PAPLNO95428 1278 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 YEATS4O95619 227 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 F13A1P00488 732 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 GAP43P17677 238 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 TKTP29401 623 aaKnown RBP12.48□□□□□ -0.41
SPEN-205ENST00000487496 OR1D2P34982 312 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 SPAG1Q07617 926 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 PKP1Q13835 747 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 FOXD4L6Q3SYB3 417 aaPredicted RBP12.48□□□□□ -0.41
SPEN-205ENST00000487496 FOXD4L3Q6VB84 417 aaPredicted RBP12.48□□□□□ -0.41
SPEN-205ENST00000487496 TRIM67Q6ZTA4 783 aa12.48□□□□□ -0.41
SPEN-205ENST00000487496 CCDC149Q6ZUS6 474 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms