RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 CLDN3O15551 220 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 KIF5CO60282 957 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 FAM189A1O60320 539 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 TSPAN1O60635 241 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 FERP16591 822 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 PROZP22891 400 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 STAT1P42224 750 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 ACOT2P49753 483 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 MCL1Q07820 350 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 PRPF4BQ13523 1007 aaKnown RBP15.33■□□□□ 0.05
CUX1-209ENST00000487284 PHLDB3Q6NSJ2 640 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 TRAF7Q6Q0C0 670 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 C15orf39Q6ZRI6 1047 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 CATSPER4Q7RTX7 472 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 UBE2Q1Q7Z7E8 422 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 KIAA1328Q86T90 577 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 CDR2LQ86X02 465 aaPredicted RBP15.33■□□□□ 0.05
CUX1-209ENST00000487284 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 WDR24Q96S15 920 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 OSBPL7Q9BZF2 842 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.05
CUX1-209ENST00000487284 MYO1AQ9UBC5 1043 aa15.33■□□□□ 0.05
CUX1-209ENST00000487284 NOC2LQ9Y3T9 749 aaKnown RBP15.33■□□□□ 0.05
CUX1-209ENST00000487284 CNTNAP2Q9UHC6 1331 aa15.33■□□□□ 0.04
CUX1-209ENST00000487284 PDCD11Q14690 1871 aaKnown RBP15.33■□□□□ 0.04
CUX1-209ENST00000487284 TANC1Q9C0D5 1861 aa15.33■□□□□ 0.04
CUX1-209ENST00000487284 DCDC2CA8MYV0 355 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 CAND2O75155 1236 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ERLIN2O94905 339 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ABL1P00519 1130 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ARF4P18085 180 aaPredicted RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 ANXA13P27216 316 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 SOX5P35711 763 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 MATR3P43243 847 aaKnown RBP eCLIP15.32■□□□□ 0.04
CUX1-209ENST00000487284 CYP27A1Q02318 531 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 FAAP100Q0VG06 881 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 TMEM132AQ24JP5 1023 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 FAM26DQ5JW98 314 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ZBTB41Q5SVQ8 909 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ATF7IP2Q5U623 682 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 TSHZ1Q6ZSZ6 1077 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 FAM228AQ86W67 206 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 FBXL13Q8NEE6 735 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 MYRIPQ8NFW9 859 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 CAGE1Q8TC20 777 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 JAKMIP2Q96AA8 810 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 CPB2Q96IY4 423 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 POP1Q99575 1024 aaKnown RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 IFIH1Q9BYX4 1025 aaKnown RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 GPR88Q9GZN0 384 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 TRIP11Q15643 1979 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ALPK3Q96L96 1907 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 RCCD1A6NED2 376 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 RIOK3O14730 519 aaKnown RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 OGTO15294 1046 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 RPS6KA5O75582 802 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 DLATP10515 647 aaKnown RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 WNT7BP56706 349 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ARID5AQ03989 594 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 BFSP2Q13515 415 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 SLC18A3Q16572 532 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 FBXO47Q5MNV8 452 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 EEF1DP3Q658K8 133 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 MPZL3Q6UWV2 235 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 SV2AQ7L0J3 742 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 BRSK2Q8IWQ3 736 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 ZNF516Q92618 1163 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 SEMA4DQ92854 862 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 IRX2Q9BZI1 471 aaPredicted RBP15.32■□□□□ 0.04
CUX1-209ENST00000487284 TNFSF13BQ9Y275 285 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 PCDHA13Q9Y5I0 950 aa15.32■□□□□ 0.04
CUX1-209ENST00000487284 UMODL1Q5DID0 1318 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 PJA2O43164 708 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 KRT86O43790 486 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 LRRN2O75325 713 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 GHRP10912 638 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 PTK2Q05397 1052 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 GFPT1Q06210 699 aaPredicted RBP15.31■□□□□ 0.04
CUX1-209ENST00000487284 LPIN1Q14693 890 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 MBTPS1Q14703 1052 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 ZACNQ401N2 412 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 CCDC122Q5T0U0 273 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 TAS1R2Q8TE23 839 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 FNBP1Q96RU3 617 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 CGRRF1Q99675 332 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 TSGA10Q9BZW7 698 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 LACRTQ9GZZ8 138 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 AGO3Q9H9G7 860 aaKnown RBP15.31■□□□□ 0.04
CUX1-209ENST00000487284 L2HGDHQ9H9P8 463 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 PDE11AQ9HCR9 933 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 TRIM10Q9UDY6 481 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 PTPRJQ12913 1337 aa15.31■□□□□ 0.04
CUX1-209ENST00000487284 SCN5AQ14524 2016 aa15.3■□□□□ 0.04
CUX1-209ENST00000487284 A0A087X0T9 212 aa15.3■□□□□ 0.04
CUX1-209ENST00000487284 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms