RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 STBD1O95210 358 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 OR1D2P34982 312 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 DNM2P50570 870 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 KPNA1P52294 538 aaPredicted RBP13.06□□□□□ -0.32
TRIM56-204ENST00000487252 PDE1AP54750 535 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 HSP90AA2PQ14568 343 aaPredicted RBP13.06□□□□□ -0.32
TRIM56-204ENST00000487252 PON2Q15165 354 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 UGCGQ16739 394 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 FAM171A1Q5VUB5 890 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 RSPRY1Q96DX4 576 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 PAAF1Q9BRP4 392 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 ZNF577Q9BSK1 485 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 MINDY3Q9H8M7 445 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 RIC8AQ9NPQ8 531 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 SUCLA2Q9P2R7 463 aaPredicted RBP13.06□□□□□ -0.32
TRIM56-204ENST00000487252 EBF1Q9UH73 591 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 GIT1Q9Y2X7 761 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 ZMYM2Q9UBW7 1377 aa13.06□□□□□ -0.32
TRIM56-204ENST00000487252 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 ZNF197O14709 1029 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 ATG13O75143 517 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 MAFO75444 373 aaPredicted RBP13.05□□□□□ -0.32
TRIM56-204ENST00000487252 IGHDP01880 384 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 CYP3A4P08684 503 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 SDSP20132 328 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 LMAN2Q12907 356 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
TRIM56-204ENST00000487252 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 ADAMTS14Q8WXS8 1223 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 E2F7Q96AV8 911 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 EIF2AQ9BY44 585 aaKnown RBP13.05□□□□□ -0.32
TRIM56-204ENST00000487252 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 SLC8A2Q9UPR5 921 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 HES2Q9Y543 173 aa13.05□□□□□ -0.32
TRIM56-204ENST00000487252 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
TRIM56-204ENST00000487252 PTPRBP23467 1997 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 DDAH1O94760 285 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 CLK2P49760 499 aaKnown RBP13.04□□□□□ -0.32
TRIM56-204ENST00000487252 SRSF1Q07955 248 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIM56-204ENST00000487252 GRIK3Q13003 919 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 TYW1BQ6NUM6 668 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 ZSCAN18Q8TBC5 510 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-204ENST00000487252 NLRP4Q96MN2 994 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 CORO1BQ9BR76 489 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 PI4KAP42356 2102 aa13.04□□□□□ -0.32
TRIM56-204ENST00000487252 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
TRIM56-204ENST00000487252 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 ERICH2A1L162 156 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 KIF4AO95239 1232 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 ZNF76P36508 570 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 GNAQP50148 359 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 EPHA5P54756 1037 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 AP3B2Q13367 1082 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 CEP57Q86XR8 500 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 SCUBE3Q8IX30 993 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 CMTR1Q8N1G2 835 aaKnown RBP13.03□□□□□ -0.32
TRIM56-204ENST00000487252 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 GTSE1Q9NYZ3 720 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 ATMQ13315 3056 aa13.03□□□□□ -0.32
TRIM56-204ENST00000487252 hCG_1642624A0A1W2PR95 340 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 ABLIM3O94929 683 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 FGFR3P22607 806 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
TRIM56-204ENST00000487252 SETQ01105 290 aaPredicted RBP13.02□□□□□ -0.33
TRIM56-204ENST00000487252 ELAVL2Q12926 359 aaKnown RBP13.02□□□□□ -0.33
TRIM56-204ENST00000487252 HNRNPDQ14103 355 aaKnown RBP13.02□□□□□ -0.33
TRIM56-204ENST00000487252 MTERF2Q49AM1 385 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.33
TRIM56-204ENST00000487252 CYP2U1Q7Z449 544 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 C11orf74Q86VG3 221 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 SKAP1Q86WV1 359 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 ZNF461Q8TAF7 563 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 HASPINQ8TF76 798 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 CCDC51Q96ER9 411 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
TRIM56-204ENST00000487252 LRRC3BQ96PB8 259 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 POLR3BQ9NW08 1133 aaPredicted RBP13.02□□□□□ -0.33
TRIM56-204ENST00000487252 SNTG2Q9NY99 539 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 COL4A3BPQ9Y5P4 624 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 BACE2Q9Y5Z0 518 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 CDY1Q9Y6F8 540 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 COL12A1Q99715 3063 aa13.02□□□□□ -0.33
TRIM56-204ENST00000487252 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 LRG1P02750 347 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 ENGP17813 658 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 ANTXR2P58335 489 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 TRDNQ13061 729 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 TUSC3Q13454 348 aa13.01□□□□□ -0.33
TRIM56-204ENST00000487252 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms