RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 STRIP1Q5VSL9 837 aa15.51■□□□□ 0.07
EPHB4-206ENST00000487222 REXO1L1PQ8IX06 675 aa15.51■□□□□ 0.07
EPHB4-206ENST00000487222 ERP44Q9BS26 406 aa15.51■□□□□ 0.07
EPHB4-206ENST00000487222 ALG13Q9NP73 1137 aaKnown RBP15.51■□□□□ 0.07
EPHB4-206ENST00000487222 PSMC3IPQ9P2W1 217 aaPredicted RBP15.51■□□□□ 0.07
EPHB4-206ENST00000487222 NEU2Q9Y3R4 380 aa15.51■□□□□ 0.07
EPHB4-206ENST00000487222 TMEM247A6NEH6 219 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 ADORA2BP29275 332 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 CUL3Q13618 768 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 VPS72Q15906 364 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 FASTKD1Q53R41 847 aaKnown RBP15.5■□□□□ 0.07
EPHB4-206ENST00000487222 XKR3Q5GH77 459 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 CATSPER1Q8NEC5 780 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 RAPGEF5Q92565 580 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 OLA1Q9NTK5 396 aaKnown RBP15.5■□□□□ 0.07
EPHB4-206ENST00000487222 SMARCAL1Q9NZC9 954 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 F5H423 210 aaPredicted RBP15.5■□□□□ 0.07
EPHB4-206ENST00000487222 KLRC1P26715 233 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.078e-6■■□□□ 12.8
EPHB4-206ENST00000487222 SNRNP35Q16560 246 aaKnown RBP15.5■□□□□ 0.07
EPHB4-206ENST00000487222 WDR72Q3MJ13 1102 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 OR2W6PQ8NHA6 318 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 TSSK1BQ9BXA7 367 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 SLC24A3Q9HC58 644 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 GGT7Q9UJ14 662 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 MYL3P08590 195 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 MYBP10242 640 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 FBXW10Q5XX13 1052 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 GRAMD4Q6IC98 578 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 ZNF560Q96MR9 790 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 DBR1Q9UK59 544 aaKnown RBP15.5■□□□□ 0.07
EPHB4-206ENST00000487222 CPS1P31327 1500 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 GOLGA8RI6L899 631 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 EIF3DO15371 548 aaKnown RBP eCLIP15.5■□□□□ 0.07
EPHB4-206ENST00000487222 ANP32DO95626 131 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 OR6P1Q8NGX9 317 aa15.5■□□□□ 0.07
EPHB4-206ENST00000487222 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.5■□□□□ 0.07
EPHB4-206ENST00000487222 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 NDUFB10O96000 172 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 IFNA8P32881 189 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 NME3Q13232 169 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 PIGHQ14442 188 aaPredicted RBP15.49■□□□□ 0.07
EPHB4-206ENST00000487222 STILQ15468 1287 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 IMPG1Q17R60 797 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 DNAL1Q4LDG9 190 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 TRPM8Q7Z2W7 1104 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 CPA5Q8WXQ8 436 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 KIF12Q96FN5 646 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 TRIM62Q9BVG3 475 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 TMEM117Q9H0C3 514 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 ALG6Q9Y672 507 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 TRIM66O15016 1216 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 KCNN4O15554 427 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 FAM107AO95990 144 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 C16orf86Q6ZW13 317 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
EPHB4-206ENST00000487222 RNF149Q8NC42 400 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 SPATA33Q96N06 139 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 BATF3Q9NR55 127 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 PLAGL2Q9UPG8 496 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 SLC4A7Q9Y6M7 1214 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 P4HA2O15460 535 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 ZBTB7AO95365 584 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 NTSR2O95665 410 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 RASA1P20936 1047 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 COMTP21964 271 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 STAT5BP51692 787 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 CAPRIN1Q14444 709 aaKnown RBP15.49■□□□□ 0.07
EPHB4-206ENST00000487222 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 C2orf69Q8N8R5 385 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 SNX19Q92543 992 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 CYFIP2Q96F07 1278 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 IL17RAQ96F46 866 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 TNIP3Q96KP6 325 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 GCNAQ96QF7 691 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 OSBPL8Q9BZF1 889 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 PCDHB2Q9Y5E7 798 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 PRKCBP05771 671 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 PDHBP11177 359 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 RPA1P27694 616 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 SSTR3P32745 418 aaPredicted RBP15.49■□□□□ 0.07
EPHB4-206ENST00000487222 KDSRQ06136 332 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 KCNB2Q92953 911 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 ZNF668Q96K58 619 aaPredicted RBP15.49■□□□□ 0.07
EPHB4-206ENST00000487222 KLHL11Q9NVR0 708 aa15.49■□□□□ 0.07
EPHB4-206ENST00000487222 SMAPO00193 183 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 SERPINB9P50453 376 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 ARMC2Q8NEN0 867 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 ARL8AQ96BM9 186 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 ZC3H7BQ9UGR2 993 aaKnown RBP15.48■□□□□ 0.07
EPHB4-206ENST00000487222 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 AP3B1O00203 1094 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 SESN2P58004 480 aaPredicted RBP15.48■□□□□ 0.07
EPHB4-206ENST00000487222 GRIN1Q05586 938 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 C16orf87Q6PH81 154 aa15.48■□□□□ 0.07
EPHB4-206ENST00000487222 RBBP8NLQ8NC74 664 aaPredicted RBP15.48■□□□□ 0.07
EPHB4-206ENST00000487222 PDCD6IPQ8WUM4 868 aaKnown RBP15.48■□□□□ 0.07
EPHB4-206ENST00000487222 ARHGEF26Q96DR7 871 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms