RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 NOL10Q9BSC4 688 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 FSD1Q9BTV5 496 aa7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 OSBPL5Q9H0X9 879 aaPredicted RBP7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 DBR1Q9UK59 544 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 NUDT5Q9UKK9 219 aa7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 PALD1Q9ULE6 856 aa7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 ABT1Q9ULW3 272 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 APOBEC2Q9Y235 224 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 YBX2Q9Y2T7 364 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 NUB1Q9Y5A7 615 aa7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 RFX7Q2KHR2 1363 aa7.33□□□□□ -1.24
RTFDC1-209ENST00000487211 MAN2B1O00754 1011 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 SGSM2O43147 1006 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 GPR39O43194 453 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 TADA3O75528 432 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 MBD4O95243 580 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 CYBBP04839 570 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 PMLP29590 882 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 NF2P35240 595 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 LSSP48449 732 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 PLCD1P51178 756 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 GUCY2FP51841 1108 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 HUNKP57058 714 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 IRF9Q00978 393 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 OCRLQ01968 901 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 FYB2Q5VWT5 728 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 RNF219Q5W0B1 726 aaPredicted RBP7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 CYP4F22Q6NT55 531 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 PAQR3Q6TCH7 311 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 CCDC129Q6ZRS4 1044 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 C11orf74Q86VG3 221 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 RBM12BQ8IXT5 1001 aaKnown RBP7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 NLGN4XQ8N0W4 816 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 PEX11GQ96HA9 241 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 FAM227BQ96M60 508 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 SMOC1Q9H4F8 434 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 DCP1AQ9NPI6 582 aaPredicted RBP7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 SPTLC3Q9NUV7 552 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 TYW1Q9NV66 732 aaKnown RBP7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 OXSMQ9NWU1 459 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 H2AFY2Q9P0M6 372 aaPredicted RBP7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 MYOTQ9UBF9 498 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 SAP30BPQ9UHR5 308 aaKnown RBP7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 SRPK3Q9UPE1 567 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 SSC5DA1L4H1 1573 aa7.32□□□□□ -1.24
RTFDC1-209ENST00000487211 FLT1P17948 1338 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 PAPPA2Q9BXP8 1791 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 NUDT19A8MXV4 375 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 SCDO00767 359 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 FOXP2O15409 715 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 GPAA1O43292 621 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 HIP1RO75146 1068 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 MPOP05164 745 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 PDGFRBP09619 1106 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ERVFRD-1P60508 538 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 FKBP1BP68106 108 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 RRP1BQ14684 758 aaKnown RBP7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 RAB3GAP1Q15042 981 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ZNF174Q15697 407 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 SLC4A8Q2Y0W8 1093 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ATP13A4Q4VNC1 1196 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 FIGNQ5HY92 759 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ADGRF1Q5T601 910 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 CPZQ66K79 652 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 RGMBQ6NW40 437 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ARMC9Q7Z3E5 817 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 SPATS2Q86XZ4 545 aaKnown RBP7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 CERS3Q8IU89 383 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 PHOSPHO1Q8TCT1 267 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ZKSCAN4Q969J2 545 aaPredicted RBP7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 INTS4Q96HW7 963 aaKnown RBP7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 CLMNQ96JQ2 1002 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 CAPNS2Q96L46 248 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 CRNKL1Q9BZJ0 848 aaKnown RBP7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ZFP64Q9NPA5 681 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 SLC5A4Q9NY91 659 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ZNF112Q9UJU3 913 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 PCDHB4Q9Y5E5 795 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ATP23Q9Y6H3 246 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 OAS3Q9Y6K5 1087 aaKnown RBP7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 SLC4A4Q9Y6R1 1079 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 ATRNL1Q5VV63 1379 aa7.31□□□□□ -1.24
RTFDC1-209ENST00000487211 CYP2D7A0A087X1C5 515 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 A0A0D9SFI3 127 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 LTFP02788 710 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 ZBTB48P10074 688 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 CYP2D6P10635 497 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 JAG1P78504 1218 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 TUSC3Q13454 348 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 PLEKHG6Q3KR16 790 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 MCMDC2Q4G0Z9 681 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 BRDTQ58F21 947 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 VPS53Q5VIR6 699 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 CREB3L3Q68CJ9 461 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 FSTL4Q6MZW2 842 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 CTR9Q6PD62 1173 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 CWC27Q6UX04 472 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 KCTD1Q719H9 257 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 MILR1Q7Z6M3 343 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms