RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MAN1C1Q9NR34 630 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 ANKEF1Q9NU02 776 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 PARP2Q9UGN5 583 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 DACH1Q9UI36 760 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 SORCS3Q9UPU3 1222 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 NR2E1Q9Y466 385 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 ATRXP46100 2492 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 USP34Q70CQ2 3546 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 LRRIQ4A6NIV6 560 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 BECN2A8MW95 431 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 SLC26A4O43511 780 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 DGAT1O75907 488 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 MYL1P05976 194 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 MXD4Q14582 209 aaPredicted RBP10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 IQCB1Q15051 598 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 EEF1DP3Q658K8 133 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 NOTUMQ6P988 496 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 SARM1Q6SZW1 724 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 PRSS55Q6UWB4 352 aaPredicted RBP10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 DTHD1Q6ZMT9 781 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 ZDHHC14Q8IZN3 488 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 C4orf32Q8N8J7 132 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 IQUBQ8NA54 791 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 TDRD5Q8NAT2 981 aaKnown RBP10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 ZNF707Q96C28 371 aaPredicted RBP10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 NECTIN4Q96NY8 510 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 MYADMQ96S97 322 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 GTPBP4Q9BZE4 634 aaKnown RBP10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 DNAJC25Q9H1X3 360 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 CUEDC2Q9H467 287 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 MAGEF1Q9HAY2 307 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 MRPL17Q9NRX2 175 aaKnown RBP10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 DZANK1Q9NVP4 752 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 SNTG2Q9NY99 539 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 KANSL3Q9P2N6 904 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 PPME1Q9Y570 386 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 COL4A3Q01955 1670 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 CNTNAP2Q9UHC6 1331 aa10.31□□□□□ -0.76
TMEM39A-208ENST00000486159 CCDC195A0A1B0GUA6 201 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 A0A1B0GUA9 196 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 CASTOR2A6NHX0 329 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 PTGESO14684 152 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 IKBKBO14920 756 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 INPPL1O15357 1258 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 POLR2DO15514 142 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 ADAM12O43184 909 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 GAS2O43903 313 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 ADCY5O95622 1261 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 URODP06132 367 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 NPR3P17342 541 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 AXLP30530 894 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 PTPN5P54829 565 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 MTMR3Q13615 1198 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 GIT2Q14161 759 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 TFDP1Q14186 410 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 DHX8Q14562 1220 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 BMS1Q14692 1282 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 POSTNQ15063 836 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 CWF19L1Q69YN2 538 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 EXOC8Q8IYI6 725 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 TMEM130Q8N3G9 435 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 MLKLQ8NB16 471 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 SPATA20Q8TB22 786 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 EMILIN2Q9BXX0 1053 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 RAB34Q9BZG1 259 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 CCSER1Q9C0I3 900 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 SFXN1Q9H9B4 322 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 RXFP1Q9HBX9 757 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 CHST7Q9NS84 486 aa10.3□□□□□ -0.76
TMEM39A-208ENST00000486159 EPG5Q9HCE0 2579 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 PP2D1A8MPX8 630 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 TGM5O43548 720 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 OR52Z1P0C646 297 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 CDC25BP30305 580 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 GLUD2P49448 558 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 NTHL1P78549 312 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 DSG1Q02413 1049 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 POU5F1BQ06416 359 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 IL17AQ16552 155 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 RTP2Q5QGT7 225 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 FUT10Q6P4F1 479 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 SLC27A1Q6PCB7 646 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 PADI6Q6TGC4 694 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 LUZP1Q86V48 1076 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 ZSCAN30Q86W11 494 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 PPFIBP1Q86W92 1011 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 RIN2Q8WYP3 895 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 ATOH1Q92858 354 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 SMARCE1Q969G3 411 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 GSDMAQ96QA5 445 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 RPP25Q9BUL9 199 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 TRIM6Q9C030 488 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 FZD8Q9H461 694 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 PDZD7Q9H5P4 517 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 KCNK12Q9HB15 430 aa10.29□□□□□ -0.76
TMEM39A-208ENST00000486159 SERTAD1Q9UHV2 236 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms