RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TECTAO75443 2155 aa7.68□□□□□ -1.18
VPS50-218ENST00000485994 SMIM28A0A1B0GU29 152 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 SLC16A4O15374 487 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 TRAK2O60296 914 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 PPP6R2O75170 966 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 TADA2AO75478 443 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 RECQL4O94761 1208 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 URODP06132 367 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 ADH1AP07327 375 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 CNPP09543 421 aaKnown RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 PLCG1P19174 1290 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 KLRC2P26717 231 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 RPL9P32969 192 aaKnown RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 GLUD2P49448 558 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 YARSP54577 528 aaKnown RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 STRN3Q13033 797 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 MCM6Q14566 821 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 HSP90AA2PQ14568 343 aaPredicted RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 KARSQ15046 597 aaKnown RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 CLUL1Q15846 466 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 ATAT1Q5SQI0 421 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 CES5AQ6NT32 575 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 MPZL3Q6UWV2 235 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 USP49Q70CQ1 688 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 ZNF720Q7Z2F6 126 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 KRI1Q8N9T8 703 aaKnown RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 LRRC15Q8TF66 581 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 PIK3R5Q8WYR1 880 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 EPSTI1Q96J88 318 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 FBXL18Q96ME1 805 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 ZNF396Q96N95 335 aaPredicted RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 ACAP3Q96P50 834 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 USP28Q96RU2 1077 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 KIFC3Q9BVG8 833 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 APOL6Q9BWW8 343 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 STRA6Q9BX79 667 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 CDT1Q9H211 546 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 PLEKHA4Q9H4M7 779 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 PARVGQ9HBI0 331 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 SLC38A7Q9NVC3 462 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 KLK14Q9P0G3 267 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 CNTN3Q9P232 1028 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 SEL1LQ9UBV2 794 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 PRG3Q9Y2Y8 225 aaPredicted RBP7.67□□□□□ -1.18
VPS50-218ENST00000485994 STYXL1Q9Y6J8 313 aa7.67□□□□□ -1.18
VPS50-218ENST00000485994 DOCK6Q96HP0 2047 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 TEX28O15482 410 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 CLDN3O15551 220 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 DCXO43602 365 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 TRAPPC3O43617 180 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 YEATS4O95619 227 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 SSBP05455 408 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS50-218ENST00000485994 CLTAP09496 248 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 CYP3A5P20815 502 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 PAX3P23760 479 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 MARCKSP29966 332 aaPredicted RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 SSTR3P32745 418 aaPredicted RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 TXLNAP40222 546 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 RBM10P98175 930 aaKnown RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 ZRSR1Q15695 479 aaKnown RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 ZBTB6Q15916 424 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 UPP1Q16831 310 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 TMEM132AQ24JP5 1023 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 UVSSAQ2YD98 709 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 SLC10A6Q3KNW5 377 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 RRAGBQ5VZM2 374 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 SLFN12LQ6IEE8 588 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 KIAA1841Q6NSI8 718 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 FAM173BQ6P4H8 233 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 CNNM4Q6P4Q7 775 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 ELMSAN1Q6PJG2 1045 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 CD300LGQ6UXG3 332 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 CCDC73Q6ZRK6 1079 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 SV2BQ7L1I2 683 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 BMP8AQ7Z5Y6 402 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 GPR149Q86SP6 731 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 GPBP1Q86WP2 473 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 RNF135Q8IUD6 432 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 CD302Q8IX05 232 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 MYCT1Q8N699 235 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 LNX1Q8TBB1 728 aaPredicted RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 AUTS2Q8WXX7 1259 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 EDAQ92838 391 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 HVCN1Q96D96 273 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 DNAJC19Q96DA6 116 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 ZBTB45Q96K62 511 aaPredicted RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 SNX27Q96L92 541 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 RIPOR3Q96MK2 946 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 PLIN2Q99541 437 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 REEP2Q9BRK0 252 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 TCHPQ9BT92 498 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 LRRC27Q9C0I9 530 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 CXCL16Q9H2A7 254 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
VPS50-218ENST00000485994 TBX20Q9UMR3 447 aa7.66□□□□□ -1.18
VPS50-218ENST00000485994 USP20Q9Y2K6 914 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms