RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 CDK5RAP3Q96JB5 506 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 PAAF1Q9BRP4 392 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
UBA3-210ENST00000485424 PRKD2Q9BZL6 878 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 CCDC113Q9H0I3 377 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 TBC1D17Q9HA65 648 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 POLD4Q9HCU8 107 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 TOPORSQ9NS56 1045 aaPredicted RBP14.56□□□□□ -0.08
UBA3-210ENST00000485424 TSC2P49815 1807 aa14.56□□□□□ -0.08
UBA3-210ENST00000485424 OBSL1O75147 1896 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 TTLL13PA6NNM8 815 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 E9PMD0 336 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 LAMP2P13473 410 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 PRPHP41219 470 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 HTR4Q13639 388 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 ECM1Q16610 540 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 ZNF568Q3ZCX4 644 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 RILPL1Q5EBL4 403 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 ADSSL1Q8N142 457 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 GPR152Q8TDT2 470 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 NXPE3Q969Y0 559 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 TCHPQ9BT92 498 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 MRPL4Q9BYD3 311 aaKnown RBP14.55□□□□□ -0.08
UBA3-210ENST00000485424 KMT5AQ9NQR1 393 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.55□□□□□ -0.08
UBA3-210ENST00000485424 FBXW11Q9UKB1 542 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 USP20Q9Y2K6 914 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 SPAG17Q6Q759 2223 aa14.55□□□□□ -0.08
UBA3-210ENST00000485424 F5P12259 2224 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 ANHXE9PGG2 379 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 PTGESO14684 152 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 TRAPPC3O43617 180 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 HIP1RO75146 1068 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 ZMYND10O75800 440 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 STRN3Q13033 797 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 C8orf34Q49A92 452 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 GLRA4Q5JXX5 417 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 PPM1LQ5SGD2 360 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 EEF1DP3Q658K8 133 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 C4orf32Q8N8J7 132 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 IGSF22Q8N9C0 903 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 UROC1Q96N76 676 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 KCNG1Q9UIX4 513 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 POLIQ9UNA4 740 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 TNFSF13BQ9Y275 285 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 RBM19Q9Y4C8 960 aaKnown RBP14.54□□□□□ -0.08
UBA3-210ENST00000485424 NUMBLQ9Y6R0 609 aa14.54□□□□□ -0.08
UBA3-210ENST00000485424 XYLBO75191 536 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 B3GAT3O94766 335 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 MATR3P43243 847 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBA3-210ENST00000485424 TOB1P50616 345 aaPredicted RBP14.53□□□□□ -0.08
UBA3-210ENST00000485424 OSTNP61366 133 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 FOXK2Q01167 660 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 NAB2Q15742 525 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 NT5DC1Q5TFE4 455 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.53□□□□□ -0.08
UBA3-210ENST00000485424 ST13P5Q8NFI4 369 aaPredicted RBP14.53□□□□□ -0.08
UBA3-210ENST00000485424 PIK3R5Q8WYR1 880 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 KIF2CQ99661 725 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 CLSTN3Q9BQT9 956 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 TIPINQ9BVW5 301 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 CXCL16Q9H2A7 254 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 TMEM134Q9H6X4 195 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 C17orf75Q9HAS0 396 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 ARHGEF3Q9NR81 526 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 SLC2A4RGQ9NR83 387 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 SLC38A7Q9NVC3 462 aa14.53□□□□□ -0.08
UBA3-210ENST00000485424 PP2D1A8MPX8 630 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 EDN1P05305 212 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 C8AP07357 584 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 HARSP12081 509 aaKnown RBP14.52□□□□□ -0.09
UBA3-210ENST00000485424 FSHRP23945 695 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 CDC25AP30304 524 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 GRM5P41594 1212 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 NPTX2P47972 431 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 CLCNKBP51801 687 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 SMTNP53814 917 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 SPECC1Q5M775 1068 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 RINT1Q6NUQ1 792 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 DCLRE1AQ6PJP8 1040 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 GRASPQ7Z6J2 395 aaPredicted RBP14.52□□□□□ -0.09
UBA3-210ENST00000485424 LNX1Q8TBB1 728 aaPredicted RBP14.52□□□□□ -0.09
UBA3-210ENST00000485424 FGF14Q92915 247 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 ACAP3Q96P50 834 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.52□□□□□ -0.09
UBA3-210ENST00000485424 DLGAP2Q9P1A6 1054 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 GPR179Q6PRD1 2367 aa14.52□□□□□ -0.09
UBA3-210ENST00000485424 VWA3AA6NCI4 1184 aa14.51□□□□□ -0.09
UBA3-210ENST00000485424 TMEM189-UBE2V1I3L0A0 370 aa14.51□□□□□ -0.09
UBA3-210ENST00000485424 SLC16A4O15374 487 aa14.51□□□□□ -0.09
UBA3-210ENST00000485424 DCNP07585 359 aaKnown RBP14.51□□□□□ -0.09
UBA3-210ENST00000485424 HNRNPA1P09651 372 aaKnown RBP eCLIP14.51□□□□□ -0.09
UBA3-210ENST00000485424 GJB2P29033 226 aa14.51□□□□□ -0.09
UBA3-210ENST00000485424 MCM2P49736 904 aa14.51□□□□□ -0.09
UBA3-210ENST00000485424 NTHL1P78549 312 aa14.51□□□□□ -0.09
UBA3-210ENST00000485424 ANKS3Q6ZW76 656 aa14.51□□□□□ -0.09
UBA3-210ENST00000485424 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
UBA3-210ENST00000485424 PPP1R10Q96QC0 940 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms