RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 TEKT3Q9BXF9 490 aa9.53□□□□□ -0.88
DDX39B-221ENST00000484566 LRRC2Q9BYS8 371 aa9.53□□□□□ -0.88
DDX39B-221ENST00000484566 RXFP1Q9HBX9 757 aa9.53□□□□□ -0.88
DDX39B-221ENST00000484566 LTB4R2Q9NPC1 389 aa9.53□□□□□ -0.88
DDX39B-221ENST00000484566 UBN1Q9NPG3 1134 aa9.53□□□□□ -0.88
DDX39B-221ENST00000484566 AGPAT5Q9NUQ2 364 aa9.53□□□□□ -0.88
DDX39B-221ENST00000484566 MARCH5Q9NX47 278 aa9.53□□□□□ -0.88
DDX39B-221ENST00000484566 SUCLA2Q9P2R7 463 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-221ENST00000484566 TEP1Q99973 2627 aaKnown RBP9.53□□□□□ -0.88
DDX39B-221ENST00000484566 FAM170BA6NMN3 283 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 ZBTB43O43298 467 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 TGM5O43548 720 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 GAS2O43903 313 aaKnown RBP9.52□□□□□ -0.89
DDX39B-221ENST00000484566 GAS7O60861 476 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 SPATA31D3P0C874 917 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 DSG1Q02413 1049 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 TARBP2Q15633 366 aaKnown RBP9.52□□□□□ -0.89
DDX39B-221ENST00000484566 UGCGQ16739 394 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 XKR3Q5GH77 459 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 N4BP2L1Q5TBK1 243 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-221ENST00000484566 LIN9Q5TKA1 542 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 APOA5Q6Q788 366 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 PARM1Q6UWI2 310 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 AGMOQ6ZNB7 445 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 SPATA31D4Q6ZUB0 917 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 PALB2Q86YC2 1186 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 CNNM3Q8NE01 707 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 ST13P5Q8NFI4 369 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-221ENST00000484566 EXOC6Q8TAG9 804 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 FGF14Q92915 247 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 DDX23Q9BUQ8 820 aaKnown RBP9.52□□□□□ -0.89
DDX39B-221ENST00000484566 KLF16Q9BXK1 252 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-221ENST00000484566 FAM126AQ9BYI3 521 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-221ENST00000484566 C6orf50Q9HD87 102 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 CDH7Q9ULB5 785 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 F5P12259 2224 aa9.52□□□□□ -0.89
DDX39B-221ENST00000484566 IGKV6-21A0A0C4DH24 114 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 GOLGA8AA7E2F4 631 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 GOLGA8BA8MQT2 603 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 ESPNB1AK53 854 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 LILRB5O75023 590 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 PAPLNO95428 1278 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 IGHDP01880 384 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 ITGA4P13612 1032 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 GNA11P29992 359 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 CIITAP33076 1130 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 SOX11P35716 441 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 PPP2R5DQ14738 602 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 SLC44A4Q53GD3 710 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 LRCH2Q5VUJ6 765 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 TPRG1Q6ZUI0 275 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 TAS1R1Q7RTX1 841 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 MIER3Q7Z3K6 550 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 MRPL10Q7Z7H8 261 aaKnown RBP9.51□□□□□ -0.89
DDX39B-221ENST00000484566 GLYCTKQ8IVS8 523 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 COLGALT2Q8IYK4 626 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 RNF168Q8IYW5 571 aaPredicted RBP9.51□□□□□ -0.89
DDX39B-221ENST00000484566 RDM1Q8NG50 284 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 RIT2Q99578 217 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 PHF20Q9BVI0 1012 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 COLEC11Q9BWP8 271 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 NIFKQ9BYG3 293 aaKnown RBP9.51□□□□□ -0.89
DDX39B-221ENST00000484566 ZFAND3Q9H8U3 227 aa9.51□□□□□ -0.89
DDX39B-221ENST00000484566 PRMT8Q9NR22 394 aaPredicted RBP9.51□□□□□ -0.89
DDX39B-221ENST00000484566 MRPS17Q9Y2R5 130 aaKnown RBP9.51□□□□□ -0.89
DDX39B-221ENST00000484566 AKAP13Q12802 2813 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 SLC27A2O14975 620 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 MSH4O15457 936 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 XYLBO75191 536 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
DDX39B-221ENST00000484566 MLH1P40692 756 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 AFF1P51825 1210 aaKnown RBP9.5□□□□□ -0.89
DDX39B-221ENST00000484566 NRLP54845 237 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 PFKFB3Q16875 520 aaPredicted RBP9.5□□□□□ -0.89
DDX39B-221ENST00000484566 USP41Q3LFD5 358 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 FUT10Q6P4F1 479 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 ZNF852Q6ZMS4 543 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 SRGAP1Q7Z6B7 1085 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 GRASPQ7Z6J2 395 aaPredicted RBP9.5□□□□□ -0.89
DDX39B-221ENST00000484566 KSR1Q8IVT5 923 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 GPR65Q8IYL9 337 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 BICD2Q8TD16 824 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 SLC7A3Q8WY07 619 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 NELL1Q92832 810 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 LENG9Q96B70 501 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 NELL2Q99435 816 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 SH2D3AQ9BRG2 576 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 RPP25Q9BUL9 199 aaKnown RBP9.5□□□□□ -0.89
DDX39B-221ENST00000484566 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 UNC45AQ9H3U1 944 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 PARD6AQ9NPB6 346 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 FNIP2Q9P278 1114 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 POLIQ9UNA4 740 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 MTF2Q9Y483 593 aaPredicted RBP9.5□□□□□ -0.89
DDX39B-221ENST00000484566 COL4A3BPQ9Y5P4 624 aa9.5□□□□□ -0.89
DDX39B-221ENST00000484566 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms