RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 LY6G5CQ5SRR4 150 aa6.6□□□□□ -1.35
CCDC66-219ENST00000484441 PPM1NQ8N819 430 aa6.6□□□□□ -1.35
CCDC66-219ENST00000484441 PROKR1Q8TCW9 393 aa6.6□□□□□ -1.35
CCDC66-219ENST00000484441 STON2Q8WXE9 905 aa6.6□□□□□ -1.35
CCDC66-219ENST00000484441 KLHL11Q9NVR0 708 aa6.6□□□□□ -1.35
CCDC66-219ENST00000484441 SPEF1Q9Y4P9 236 aa6.6□□□□□ -1.35
CCDC66-219ENST00000484441 MRFAP1Q9Y605 127 aa6.6□□□□□ -1.35
CCDC66-219ENST00000484441 HTRA2O43464 458 aaPredicted RBP6.59□□□□□ -1.35
CCDC66-219ENST00000484441 POMCP01189 267 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 GCSHP23434 173 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 RAP2BP61225 183 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 TGFB2P61812 414 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 TARDBPQ13148 414 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCDC66-219ENST00000484441 UBXN2BQ14CS0 331 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 ACAP2Q15057 778 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 TIGD2Q4W5G0 525 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 MIGA2Q7L4E1 593 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 ARHGEF19Q8IW93 802 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 CCHCR1Q8TD31 782 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 HDAC10Q969S8 669 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 COA7Q96BR5 231 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 ADAM2Q99965 735 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 MYOCQ99972 504 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 FBXO34Q9NWN3 711 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 LIMCH1Q9UPQ0 1083 aa6.59□□□□□ -1.35
CCDC66-219ENST00000484441 USP15Q9Y4E8 981 aaPredicted RBP6.59□□□□□ -1.35
CCDC66-219ENST00000484441 GRID2IPA4D2P6 1211 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 XPOTO43592 962 aaKnown RBP6.58□□□□□ -1.36
CCDC66-219ENST00000484441 ZRANB2O95218 330 aaKnown RBP eCLIP6.58□□□□□ -1.36
CCDC66-219ENST00000484441 CFIP05156 583 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 ADKP55263 362 aaKnown RBP6.58□□□□□ -1.36
CCDC66-219ENST00000484441 CTXN1P60606 82 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 ODF1Q14990 250 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 ZNF529Q6P280 563 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 KCNV1Q6PIU1 500 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 RHOT1Q8IXI2 618 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 DCBLD1Q8N8Z6 715 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 OR56A1Q8NGH5 318 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 IFI44Q8TCB0 444 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 FUBP1Q96AE4 644 aaKnown RBP6.58□□□□□ -1.36
CCDC66-219ENST00000484441 CHFRQ96EP1 664 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 IKZF4Q9H2S9 585 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 SERPINB13Q9UIV8 391 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 NOP58Q9Y2X3 529 aaKnown RBP6.58□□□□□ -1.36
CCDC66-219ENST00000484441 FPGT-TNNI3KV9GXZ4 949 aa6.58□□□□□ -1.36
CCDC66-219ENST00000484441 WDR33Q9C0J8 1336 aaKnown RBP6.57□□□□□ -1.36
CCDC66-219ENST00000484441 FOXN1O15353 648 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 LPXNO60711 386 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 ELANEP08246 267 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 PTPN21Q16825 1174 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 BRDTQ58F21 947 aaPredicted RBP6.57□□□□□ -1.36
CCDC66-219ENST00000484441 ARMC6Q6NXE6 501 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 MED25Q71SY5 747 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 MRGPRGQ86SM5 289 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 CPEB3Q8NE35 698 aaKnown RBP6.57□□□□□ -1.36
CCDC66-219ENST00000484441 MRGPRX4Q96LA9 322 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 HOMER2Q9NSB8 354 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.57□□□□□ -1.36
CCDC66-219ENST00000484441 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
CCDC66-219ENST00000484441 ANKRD62A6NC57 917 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 TMEM191CA6NGB0 347 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 ALAS1P13196 640 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 OCA2Q04671 838 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 PTPAQ15257 358 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 C3orf36Q3SXR2 165 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 TMEM240Q5SV17 173 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
CCDC66-219ENST00000484441 C11orf54Q9H0W9 315 aaPredicted RBP6.56□□□□□ -1.36
CCDC66-219ENST00000484441 TDP1Q9NUW8 608 aa6.56□□□□□ -1.36
CCDC66-219ENST00000484441 RUVBL1Q9Y265 456 aaKnown RBP6.56□□□□□ -1.36
CCDC66-219ENST00000484441 COL4A3Q01955 1670 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 CCDC154A6NI56 674 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 PRSS23O95084 383 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 NDUFA10O95299 355 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 HLA-DOAP06340 250 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 SLC6A2P23975 617 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 DDX6P26196 483 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC66-219ENST00000484441 KIF23Q02241 960 aaPredicted RBP6.55□□□□□ -1.36
CCDC66-219ENST00000484441 COL10A1Q03692 680 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 RAB39AQ14964 217 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 EFCAB2Q5VUJ9 269 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 B3GNTL1Q67FW5 361 aaPredicted RBP6.55□□□□□ -1.36
CCDC66-219ENST00000484441 UBE3BQ7Z3V4 1068 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 PNMA8AQ86V59 439 aaPredicted RBP6.55□□□□□ -1.36
CCDC66-219ENST00000484441 MAPKAPK5Q8IW41 473 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 DMRTA2Q96SC8 542 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 CEP89Q96ST8 783 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 SERHL2Q9H4I8 314 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 SLITRK6Q9H5Y7 841 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 TYW1Q9NV66 732 aaKnown RBP6.55□□□□□ -1.36
CCDC66-219ENST00000484441 PCDHA13Q9Y5I0 950 aa6.55□□□□□ -1.36
CCDC66-219ENST00000484441 A0A087X1B8 175 aa6.54□□□□□ -1.36
CCDC66-219ENST00000484441 A0A1B0GTW7 788 aa6.54□□□□□ -1.36
CCDC66-219ENST00000484441 CCDC78A2IDD5 438 aa6.54□□□□□ -1.36
CCDC66-219ENST00000484441 ZEB1P37275 1124 aaPredicted RBP6.54□□□□□ -1.36
CCDC66-219ENST00000484441 RECQLP46063 649 aaPredicted RBP6.54□□□□□ -1.36
CCDC66-219ENST00000484441 EXOSC10Q01780 885 aaKnown RBP6.54□□□□□ -1.36
CCDC66-219ENST00000484441 TAP1Q03518 808 aa6.54□□□□□ -1.36
CCDC66-219ENST00000484441 SCAPQ12770 1279 aa6.54□□□□□ -1.36
CCDC66-219ENST00000484441 IL10RAQ13651 578 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms