RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 MTRRQ9UBK8 725 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 SPEGQ15772 3267 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 I3L4J1 428 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 MAN2B1O00754 1011 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 RECQL4O94761 1208 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 SLITRK3O94933 977 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 PMLP29590 882 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 CCR2P41597 374 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 CCR3P51677 355 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 ELAVL2Q12926 359 aaKnown RBP12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 PRSS36Q5K4E3 855 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 PDXDC1Q6P996 788 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 BLOC1S2Q6QNY1 142 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 CD300LGQ6UXG3 332 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 KRT25Q7Z3Z0 450 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 FAM3CQ92520 227 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 ZSWIM3Q96MP5 696 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 TRMT61BQ9BVS5 477 aaKnown RBP12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 NFKBIZQ9BYH8 718 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 ZNF334Q9HCZ1 680 aaPredicted RBP12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 AVENQ9NQS1 362 aaPredicted RBP12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 SNTG2Q9NY99 539 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 ANGPTL2Q9UKU9 493 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 KCNJ14Q9UNX9 436 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 USP20Q9Y2K6 914 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 SNX14Q9Y5W7 946 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 PIAS3Q9Y6X2 628 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 NCANO14594 1321 aa12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 ANKRD11Q6UB99 2663 aaPredicted RBP12.04□□□□□ -0.48
SMARCC1-205ENST00000483847 A0A087WWV3 80 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 THP07101 528 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 CHRNB1P11230 501 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 PTPN2P17706 415 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 TKTP29401 623 aaKnown RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 GDI1P31150 447 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 CXCL12P48061 93 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 IRX6P78412 446 aaPredicted RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 SSRP1Q08945 709 aaKnown RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 COL9A2Q14055 689 aaPredicted RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 PPP2R5DQ14738 602 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 WDR44Q5JSH3 913 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 HEATR6Q6AI08 1181 aaKnown RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 PPP4R3AQ6IN85 833 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 VITQ6UXI7 678 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 MAP4K3Q8IVH8 894 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 KCNB2Q92953 911 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 CORO1BQ9BR76 489 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 IER2Q9BTL4 223 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 POLR3FQ9H1D9 316 aaPredicted RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 ZFP14Q9HCL3 533 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 GPRC5CQ9NQ84 441 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 RXFP3Q9NSD7 469 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 RBM12Q9NTZ6 932 aaKnown RBP12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 C2orf42Q9NWW7 574 aa12.03□□□□□ -0.48
SMARCC1-205ENST00000483847 IGF2RP11717 2491 aa12.02□□□□□ -0.48
SMARCC1-205ENST00000483847 ARHGEF37A1IGU5 675 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 WDR27A2RRH5 827 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 LRRIQ4A6NIV6 560 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 K7ESF4 209 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 TM4SF5O14894 197 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 TBX3O15119 743 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 DGAT1O75907 488 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 DEXIO95424 95 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 EDN1P05305 212 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 CCNE1P24864 410 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 VIPR2P41587 438 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 CLCNKBP51801 687 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 EVCP57679 992 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 ROR1Q01973 937 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 SF3A2Q15428 464 aaKnown RBP12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 CCDC6Q16204 474 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 GLRA4Q5JXX5 417 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 RTL10Q7L3V2 364 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 MAEAQ7L5Y9 396 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 NEK8Q86SG6 692 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 FAM160A2Q8N612 972 aaPredicted RBP12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 C3orf58Q8NDZ4 430 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 IRF7Q92985 503 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 ASB16Q96NS5 453 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 EIF2AK1Q9BQI3 630 aaKnown RBP12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 BACE2Q9Y5Z0 518 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 LAMA1P25391 3075 aa12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 PDCD11Q14690 1871 aaKnown RBP12.02□□□□□ -0.49
SMARCC1-205ENST00000483847 CCDC194A0A1B0GVG4 234 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 PRRG1O14668 218 aa12.01□□□□□ -0.49
SMARCC1-205ENST00000483847 MARCH6O60337 910 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms