RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SIN3BO75182 1162 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 METAP2P50579 478 aaKnown RBP eCLIP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 CLCN3P51790 818 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 NLRP11P59045 1033 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 RBM10P98175 930 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 EXOSC10Q01780 885 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 AKAP17AQ02040 695 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 APOBRQ0VD83 1088 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 PWP1Q13610 501 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 COL9A3Q14050 684 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 SMC1AQ14683 1233 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 PFKFB3Q16875 520 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 PRR16Q569H4 304 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 EFCAB12Q6NXP0 572 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 LLGL2Q6P1M3 1020 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 SV2AQ7L0J3 742 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 SV2BQ7L1I2 683 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 ECHDC2Q86YB7 292 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 REXO1Q8N1G1 1221 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 VWA5B2Q8N398 1253 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 RNF169Q8NCN4 708 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 VN1R2Q8NFZ6 395 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 BICD2Q8TD16 824 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 RSPH1Q8WYR4 309 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 NECTIN4Q96NY8 510 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 CASD1Q96PB1 797 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 MRPL9Q9BYD2 267 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 ZMYND12Q9H0C1 365 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 NRBP2Q9NSY0 501 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 KBTBD4Q9NVX7 518 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 DNAJB12Q9NXW2 375 aaKnown RBP6.61□□□□□ -1.35
CSDE1-207ENST00000483407 DACT1Q9NYF0 836 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 SPG21Q9NZD8 308 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 NR2E1Q9Y466 385 aa6.61□□□□□ -1.35
CSDE1-207ENST00000483407 NLRC5Q86WI3 1866 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 A0A096LPE4 126 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 A0A1W2PPZ6 126 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CDC14CA4D256 554 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 HIDE1A8MVS5 230 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 J3QW42 95 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-207ENST00000483407 EOMESO95936 686 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CDC27P30260 824 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 AVPR2P30518 371 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 SFNP31947 248 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CIITAP33076 1130 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CA8P35219 290 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 ALDH7A1P49419 539 aaKnown RBP6.6□□□□□ -1.35
CSDE1-207ENST00000483407 IRX6P78412 446 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CDC42EP1Q00587 391 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 ITIH3Q06033 890 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 TBC1D8BQ0IIM8 1120 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 TCF15Q12870 199 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 KCNC3Q14003 757 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 BMP2KLQ5H9B9 411 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 SYCE2Q6PIF2 218 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 UBALD2Q8IYN6 164 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 LRRC71Q8N4P6 559 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 MRPL43Q8N983 215 aaKnown RBP6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CCDC148Q8NFR7 591 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CRYGNQ8WXF5 182 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 TNFRSF25Q93038 417 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 ASIC4Q96FT7 647 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM169Q96HH4 297 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 RIPOR3Q96MK2 946 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 HHIPQ96QV1 700 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 APOL5Q9BWW9 433 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 GCOM2Q9BZD3 368 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-207ENST00000483407 CEP44Q9C0F1 390 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 S1PR5Q9H228 398 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 RASSF4Q9H2L5 321 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 ADAMTS10Q9H324 1103 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 DISC1Q9NRI5 854 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 HCFC2Q9Y5Z7 792 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 KAT6AQ92794 2004 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 DOCK5Q9H7D0 1870 aa6.6□□□□□ -1.35
CSDE1-207ENST00000483407 A0A0U1RQF3 1178 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 C2orf71A6NGG8 1288 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 METTL12A8MUP2 240 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 PRPF3O43395 683 aaKnown RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 CHMP2AO43633 222 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 GAS7O60861 476 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 CXCL14O95715 111 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 DARSP14868 501 aaKnown RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 SFPQP23246 707 aaKnown RBP eCLIP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 SP100P23497 879 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 PBX3P40426 434 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 MTHFRP42898 656 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 DNM2P50570 870 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 GPC3P51654 580 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 JAK3P52333 1124 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 VCPP55072 806 aaKnown RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 PRKCEQ02156 737 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 GIT2Q14161 759 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 SPRED3Q2MJR0 410 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 ADCK5Q3MIX3 580 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-207ENST00000483407 LRRC55Q6ZSA7 311 aa6.59□□□□□ -1.35
CSDE1-207ENST00000483407 RELL1Q8IUW5 271 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms